Pairwise Alignments

Query, 388 a.a., arabinose transporter permease from Pseudomonas simiae WCS417

Subject, 397 a.a., efflux protein from Sinorhizobium meliloti 1021

 Score =  322 bits (824), Expect = 2e-92
 Identities = 172/377 (45%), Positives = 244/377 (64%), Gaps = 5/377 (1%)

Query: 1   MPLSLLILALSAFAIGTTEFVIMGLLPDVAADLGVSIPGAGWLVTGYALGVAIGAPFMAL 60
           MPL++  L ++A+AIGTTEFVI+GLLP VA DL +++P AG +V+ YALGV  GAP +  
Sbjct: 1   MPLAIFALTIAAYAIGTTEFVIVGLLPTVATDLAITLPLAGLIVSVYALGVTFGAPVLTA 60

Query: 61  ATAKLPRKAALVALMGIFIIGNLLCALASDYNVLMFARVVTALCHGAFFGIGSVVAANLV 120
            T ++ RK  L+ LM +FI GN   AL+ +Y VL+ ARV++A  HG FF +GS +AA+LV
Sbjct: 61  LTGRIERKPLLLGLMALFIGGNTAAALSPNYEVLLVARVLSAFAHGVFFSVGSTIAADLV 120

Query: 121 PANKRASAVALMFTGLTLANVLGVPLGTALGQEAGWRSTFWAVTVIGVVALIGLIRFLPA 180
           P N+RASA+A+MF GLT+A V GVP+GT +GQ  GWR+TFW V+ +GVVA  G+   LP 
Sbjct: 121 PENRRASAIAMMFMGLTVAIVTGVPIGTYIGQVFGWRATFWGVSGLGVVAFAGIATLLPG 180

Query: 181 KRDEEKLDMRAELAALKGAG-IWLSLSMTALFAASMFTLFTYVAPLLGDVTGVSPKGVTW 239
              +       +   + G+G + +  +MTAL     F  FT++AP+L +VTG S + V+ 
Sbjct: 181 TLAKAAPASLLDQVRVLGSGRLLIVFAMTALGYGGTFVAFTFLAPILQEVTGFSERSVSL 240

Query: 240 TLLLIGLGLTVGNIIGGKLADKRLAATLIGVFISMAVVSTALTWTSVAVIPTEITLFLWA 299
            L+L G+ + +GNI GG++A+      LIG+F+  A+V    ++T+V+ + T +TL    
Sbjct: 241 ILVLYGVAIAIGNIAGGRIANTNPVKALIGLFLLQALVLVIFSFTAVSPVLTLVTLAALG 300

Query: 300 TASFAAVPALQINVVTFG----KAAPNLVSTLNIGAFNIGNALGAWVGGSVIAHGFGLTR 355
             SFA VP LQ+ VV         A ++ S LNI AFN+G ALGAW+GG V+   FGL+ 
Sbjct: 301 FLSFANVPGLQLYVVQLAMEHRPGAVDVASALNIAAFNLGIALGAWLGGMVVDSPFGLSA 360

Query: 356 VPLAAAVLAILALLVTL 372
            P   A+L   ALL+TL
Sbjct: 361 TPWVGAILVSGALLLTL 377