Pairwise Alignments

Query, 1053 a.a., multidrug transporter from Pseudomonas simiae WCS417

Subject, 1048 a.a., Multidrug efflux pump subunit AcrB from Enterobacter sp. TBS_079

 Score = 1371 bits (3548), Expect = 0.0
 Identities = 694/1046 (66%), Positives = 843/1046 (80%), Gaps = 11/1046 (1%)

Query: 1    MSKFFIDRPIFAWVIALVIMLVGALSILKLPINQYPAIAPTAIDIQVTYPGASAQTVQDT 60
            M  FFIDRPIFAWVIA++IML G L+ILKLP+ QYP IAP A+ I  TYPGA A+TVQDT
Sbjct: 1    MPNFFIDRPIFAWVIAIIIMLAGGLAILKLPVAQYPTIAPPAVTISATYPGADAKTVQDT 60

Query: 61   VVQVIEQQLNGIDNLRYVSSDSNSDGSMTITVTFNQGTNPDIAQVQVQNKLNLATPLLPQ 120
            V QVIEQ +NGIDNL Y+SS+S+S G++ IT+TF  GT+ DIAQVQVQNKL LA PLLPQ
Sbjct: 61   VTQVIEQNMNGIDNLMYMSSNSDSTGTVQITLTFQSGTDADIAQVQVQNKLQLAMPLLPQ 120

Query: 121  EVQQQGIRVTKSVKNFLMVIGLVSEDGSMTKDDLSNYIVSNIQDPISRTAGVGDFQVFGS 180
            EVQQQG+ V KS  +FLMV+G+++ +G+MT++D+S+Y+ +N++D ISRT+GVGD Q+FGS
Sbjct: 121  EVQQQGVSVEKSSSSFLMVVGVINTNGTMTQEDISDYVGANMKDAISRTSGVGDVQLFGS 180

Query: 181  QYAMRIWLDPSKLNNYQLTPVDVSTAISAQNVQVATGQLGGLPALPGTQLNATIIGKTRL 240
            QYAMRIW+DP+KLNN+QLTPVDV  AI AQN QVA GQLGG P + G QLNA+II +TRL
Sbjct: 181  QYAMRIWMDPNKLNNFQLTPVDVINAIKAQNAQVAAGQLGGTPPVKGQQLNASIIAQTRL 240

Query: 241  QTAEQFGNILMKVNTDGSQVRLKDVARIELGGQNYSIAAQFNGKPASGMAIKLASGANAL 300
             +A++F  IL+KVN DGSQVRL+DVA++ELGG+NY I A+FNGKPASG+ IKLA+GANAL
Sbjct: 241  TSADEFSKILLKVNQDGSQVRLRDVAKVELGGENYDIIAKFNGKPASGLGIKLATGANAL 300

Query: 301  DTGKAIRATVAQLEPFFPPGMKAVVPYDTTPVVTESISGVVHTLVEAIVLVFLVMFLFLQ 360
            DT  AIRA + ++EPFFP G+K V PYDTTP V  SI  VV TL EAI+LVFLVM+LFLQ
Sbjct: 301  DTATAIRAELKKMEPFFPSGLKIVYPYDTTPFVKISIHEVVKTLAEAIILVFLVMYLFLQ 360

Query: 361  NFRATIITTMTVPVVLLGTFGILAAFGFTINTLTMFGMILAIGLLVDDAIVVVENVERVM 420
            NFRAT+I T+ VPVVLLGTF ILA FG++INTLTMFGM+LAIGLLVDDAIVVVENVERVM
Sbjct: 361  NFRATLIPTIAVPVVLLGTFAILAIFGYSINTLTMFGMVLAIGLLVDDAIVVVENVERVM 420

Query: 421  AEEHLSPKEATVKSMGQIQGALVGIALVLSAVLLPMAFFGGSTGVIYKQFSITIVSAMAL 480
            AEE L PKEAT KSMGQIQGALVGIA+VLSAV +PMAFFGGSTG IY+QFSITIVSAMAL
Sbjct: 421  AEEGLPPKEATRKSMGQIQGALVGIAMVLSAVFIPMAFFGGSTGAIYRQFSITIVSAMAL 480

Query: 481  SVLVALIFTPALCATMLKPIDPEKHGQPKRGFFGWFNRTFDRGVLSYERGVGNMIKHKIP 540
            SVLVALI TPALCATMLKP+    HG+ K GFFGWFNR FD+    Y   VGN+++    
Sbjct: 481  SVLVALILTPALCATMLKPVQKGGHGEHK-GFFGWFNRMFDKSTHHYTDSVGNILRSTGR 539

Query: 541  AFLVYALVIAGMIWLFMRIPAAFLPDEDQGVIFAQVQTPVGSTAERTQKVIDDMRIFLLN 600
              L+Y +++ GM +LF+R+P++FLPDEDQGV     Q P G++ ERTQKV+D++  + L 
Sbjct: 540  YLLLYIIIVVGMAYLFVRLPSSFLPDEDQGVFLTMAQLPAGASQERTQKVLDEVTDYYLT 599

Query: 601  DKEGEPGEGKGVKSVFTVNGFNFAGRGQSSGLAFVMLKPWDERDASTSVFE-IAKRAQGY 659
                   E   V+SVF VNGF FAGRGQ++G+AFV LK W ER    +  E I  RA G 
Sbjct: 600  K------EKANVESVFAVNGFGFAGRGQNTGIAFVSLKDWSERPGEENKVEAITGRAMGT 653

Query: 660  FMQTFKDAMVFAIVPPSVLELGNATGFDVFLQDQGGVGHDKLMAARNQFLG-MAAQSKIL 718
            F Q  KDAMVFA   P+++ELG ATGFD  L DQGG+GH+KL  ARNQ  G +A    +L
Sbjct: 654  FSQ-IKDAMVFAFNLPAIVELGTATGFDFQLIDQGGLGHEKLTQARNQLFGEVAKHPDLL 712

Query: 719  AGVRPNGVNDEPQYELTVDDEKASAQGITLSSINQTLAIALGGSYVNDFIDRGRVKKVYV 778
             GVRPNG+ D PQY++ +D EKA A G+++S IN TL  A GGSYVNDFIDRGRVKKVYV
Sbjct: 713  VGVRPNGLEDTPQYKIDIDQEKAQALGVSISDINTTLGAAWGGSYVNDFIDRGRVKKVYV 772

Query: 779  QGEAASRMSPEDLNKWYVRSDSGKMVPLSAIASGKWIFGSPKLSRYNGVAAMEILGTPAP 838
              EA  RM P D+N WYVR ++G+MVP S+ ++  W +GSP+L RYNG+ +MEILG  AP
Sbjct: 773  MSEAQYRMLPNDINNWYVRGNNGQMVPFSSFSTSHWEYGSPRLERYNGLPSMEILGQAAP 832

Query: 839  GYSTGDAMAEVERIAKQLPAGIGYAWTGLSYEERLSGSQAPALYALSLLVVFLCLAALYE 898
            G STG+AM  +E +A +LPAGIGY WTG+SY+ERLSG+QAPALYA+SL+VVFLCLAALYE
Sbjct: 833  GRSTGEAMNLMEELAGKLPAGIGYDWTGMSYQERLSGNQAPALYAISLIVVFLCLAALYE 892

Query: 899  SWSIPIAVILVVPLGVVGALIATSMRGLSNDVFFQVGLLVTVGLAAKNAILIVEFAKELH 958
            SWSIP +V+LVVPLGV+GAL+A + RGL+NDV+FQVGLL T+GL+AKNAILIVEFAK+L 
Sbjct: 893  SWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLM 952

Query: 959  E-QGKGIVEAAIEASRMRLRPIIMTSMAFILGVLPLAISSGAGSGSQHAIGTGVIGGMIT 1017
            E +GKG++EA ++A RMRLRPI+MTS+AFILGV+PL IS+GAGSG+Q+A+GTGV+GGM+T
Sbjct: 953  EKEGKGLIEATLDAVRMRLRPILMTSLAFILGVMPLVISTGAGSGAQNAVGTGVMGGMVT 1012

Query: 1018 ATVLAIFWVPLFFATVSAAGERKKTD 1043
            ATVLAIF+VP+FF  V     RK  D
Sbjct: 1013 ATVLAIFFVPVFFVVVRRRFSRKNED 1038