Pairwise Alignments

Query, 416 a.a., porin from Pseudomonas simiae WCS417

Subject, 448 a.a., outer membrane porin from Pseudomonas syringae pv. syringae B728a

 Score =  219 bits (559), Expect = 1e-61
 Identities = 149/451 (33%), Positives = 225/451 (49%), Gaps = 45/451 (9%)

Query: 7   RRLLLATAVASLALPVVAEEHGFLEDASANLNLRNFFFNRNYTNPTKAQGGAQEWTQSFI 66
           ++  LA AV    L   A   GFLED+ A+++ R  +FN +     +A    +E +    
Sbjct: 2   KKSTLALAVTVGVLAQQASAAGFLEDSKASVSSRTLYFNNDLREGFRASD-QRETSTGLK 60

Query: 67  LDAKSGFTQGTVGFGVDVLGLYSLKLDGG----RGTGGTQLLPLDHDGRPADEFGRLGVA 122
            D  SGFTQGTVGFG+D   +  L L GG           ++P D DG    ++ R+G  
Sbjct: 61  FDYLSGFTQGTVGFGLDAQAVMGLHLGGGIEHHNANTANTVVPTDTDGSSVSDWSRVGAN 120

Query: 123 FKARISKTEVKVGEWM-PVLPILRSDDGRSLPQTLRGGQITSKEIDGLTLYGGQFRANSP 181
            K R SKTE+KVG  + P LPIL S+DGR LPQ   GG +TSK++D +T   GQ   +  
Sbjct: 121 AKMRFSKTELKVGNALAPNLPILVSNDGRLLPQAFEGGILTSKDLDNVTFTAGQLNKSIG 180

Query: 182 RDDSSMNDLSMFGKTAFTSDRFNFQGAEYAFNDKRTQIGLWNAQLKDIYSQQFINLIHSQ 241
           R  S+  DLS+ G T  T+D+F F GA++    K   +  + A L+D Y Q F+ L+H  
Sbjct: 181 RASSNWTDLSVAGATQ-TADQFRFAGADWKVT-KDLTLQYYYANLEDFYKQHFLGLVHVY 238

Query: 242 PLGN-WTLGANLGFFYGKDDG-----------------SARAGELDNKTWSGLFSAKYGG 283
            + N  +   +L +F    DG                 ++  GE+DN+TWS +F+   GG
Sbjct: 239 QIDNDQSFKTDLRYFNSSADGKNSEAAAGYRFNNNGGYASHTGEVDNQTWSAMFTYALGG 298

Query: 284 NTFYLGLQKLTGNSAWM---------------RVNGTSGGTLANDSYNASYDNAQEKSWQ 328
           ++F +G Q++ G+S  M                 NG S   L  DS    ++ A E +  
Sbjct: 299 HSFMVGHQQV-GDSGGMVYLGQGNVVDGRGRPEGNGGSSFYLFTDSMINGFNRAGENTTF 357

Query: 329 VRHDYNFAALGVPGLTLMNRYISGSNVH--TGTVTDGKEWGRESELGYTVQSGSLKNLTV 386
            ++ Y+FA +GVPGL     Y+SG ++      +    EW R+  + Y +QSG LK    
Sbjct: 358 GQYSYDFAKVGVPGLKAAIAYLSGDDIRDVNRNLGSHSEWERDMRVDYVIQSGPLKGFGT 417

Query: 387 RLRNSSMRRDYSNN-EFDENRLIVSYPISLL 416
            +R+ S R D +   + D+ R++ +Y  S +
Sbjct: 418 TVRHGSFRGDSATTADTDQTRILFNYTYSFM 448