Pairwise Alignments

Query, 288 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 306 a.a., transcriptional regulator GcvA from Vibrio cholerae E7946 ATCC 55056

 Score =  160 bits (405), Expect = 3e-44
 Identities = 99/261 (37%), Positives = 144/261 (55%), Gaps = 15/261 (5%)

Query: 3   LHKDLPPLLALRAFEAVARHLSFIKAASELSVTQSALSHQVQKLEQHLGKPLFIRRTRAI 62
           + + LPPL +L+ FEA ARHLSF +AA EL VTQ+A+SHQ++ LE+ LG  LF RR R++
Sbjct: 1   MSRRLPPLNSLKVFEAAARHLSFTRAAEELFVTQAAVSHQIKALEEFLGLKLFRRRNRSL 60

Query: 63  DLTADGQQYYDEIRPALDAIAAATRTQRVAPRATVLRIGLLASFATLWLAPRLAGFLTRY 122
            LT +GQ Y+ +I+    ++A AT           L I L  SFA  WL PRLA F  + 
Sbjct: 61  LLTEEGQSYFLDIKDIFSSLAEATDKLLERSEKGALTISLPPSFAIQWLVPRLADFNQQE 120

Query: 123 PHIQVELLPSIQLANVAAAEVDLAIRYGKGDWPDVQATRLMQEVISPVCSPTF----KAM 178
           P I V +            +VD+AI YG+G WP ++A +L QE + P+CSP      K M
Sbjct: 121 PDIDVRIKAVDMDEGSLTDDVDVAIYYGRGSWPGLRADKLYQEFLIPLCSPALLLGNKPM 180

Query: 179 QD------SPLLMATSHRPFEWTDWSAHYQVD--LAHHPRVMLHDYNIVVEAAVAGQGIA 230
           +         LL  TS +  +W  ++    +D    +H  +  H   +V++AA  GQG+A
Sbjct: 181 EKLSDLAYHTLLHDTSRK--DWKQFAKENGLDNVNVNHGPIFSHS-TMVLQAAAHGQGVA 237

Query: 231 MGRHRLIERRLQDGSLVEAFD 251
           +G + L +  +  G L+  FD
Sbjct: 238 LGNNVLAQPEIDAGRLIAPFD 258