Pairwise Alignments

Query, 375 a.a., ABC transporter for branched-chain amino acids, substrate-binding component (from data) from Pseudomonas simiae WCS417

Subject, 372 a.a., leucine-specific binding protein from Sinorhizobium meliloti 1021

 Score =  302 bits (773), Expect = 1e-86
 Identities = 165/359 (45%), Positives = 222/359 (61%), Gaps = 2/359 (0%)

Query: 9   SKLFAAMVLAGVAGHSFAADTIKIGIAGPKTGPVTQYGDMQFMGAKQAIADINAKGGVDG 68
           S L A  + A VA    A   I +G+ GP TGP   +G     GA+QA  DINA GG++G
Sbjct: 4   SLLSAVALTAMVAFSGTAWADILVGVGGPLTGPNAAFGAQLQKGAEQAAEDINAAGGING 63

Query: 69  KMLEAKEYDDACDPKQAVAVANKVVNDGVKFVVGHLCSSSTQPASDIYEDEGVIMITPAA 128
           + ++    DD  DPKQ V+VA K V DGVKFVVGH  S  + PAS+IY + G++ +TPA+
Sbjct: 64  EQIKVVLGDDVSDPKQGVSVAQKFVADGVKFVVGHFNSGVSIPASEIYAENGILQVTPAS 123

Query: 129 TSPEITARGYKLIFRTIGLDSAQGPAAGNYIADHVKPKIVAVLHDKQQYGEGIATAVKQT 188
           T+P+ T RG    FRT G D  QG  AG YIA + K   VAV+HDK  YG+G+A   K++
Sbjct: 124 TNPQFTERGLWNTFRTCGRDDQQGAVAGAYIAANFKDAKVAVIHDKTPYGQGLADETKKS 183

Query: 189 LEKKGTKVAVFEGLNAGDKDFSSIIQKLKQANVDFVYYGGYHPELGLILRQAKEKGLNAK 248
           + + G   A++EG+N GDKDFS++I K+KQA V  VYYGG H E GLI+RQ K++GL A 
Sbjct: 184 MNEAGVTEALYEGINTGDKDFSALIAKMKQAGVSIVYYGGLHTEAGLIMRQMKDQGLKAT 243

Query: 249 FMGPEGVGNDSISQIAQGASEGLLVTLPKSFDTDPANKAIVEEFAKNKQDPTGPFVFPAY 308
            M  +G+ ++ ++ IA  A +G L+T        PA K +VE+F     +P   +   AY
Sbjct: 244 MMSGDGIVSNELASIAGDAVDGTLMTFAPDPRKSPAAKDLVEKFRAAGFEPEA-YTLYAY 302

Query: 309 SAIEVIAGGIKAAKSEDTAKVAEAIHA-GTFKTPTGDLSFDAKGDLKDFKFVVYEWHFG 366
           +A++VIA G KAA + D   VAEAI A G FKT  G+L FD KGD+    +V+Y W  G
Sbjct: 303 AALQVIAEGAKAAGNTDPQAVAEAIKAKGPFKTAIGELGFDEKGDITRPDYVMYTWKKG 361