Pairwise Alignments

Query, 306 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 327 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  108 bits (271), Expect = 1e-28
 Identities = 81/299 (27%), Positives = 136/299 (45%), Gaps = 12/299 (4%)

Query: 5   DMNLLVALDALLDEGSVVGAARRMNLSPAAMSRTLTRIREAVGDPILVRAGRGLVPTPKA 64
           D+NLLV L  L++E SV  AA R+ LS +A+S++L ++RE   DP+ VR   GL  TPKA
Sbjct: 24  DLNLLVCLKVLIEELSVTRAAARLCLSQSAVSKSLAKLREQFDDPLFVRTSYGLNATPKA 83

Query: 65  LQLQGQVRNVVEQAALLFRSADQVDLSTLRRRFSVRANDFFIGVYGGRLFDTMERMAPLC 124
           L L+ ++  +V Q  LL + A     S+   RF + A +    +       T+ R  P  
Sbjct: 84  LFLKPKLDVLVNQLELLTQPAHFSPQSS-EYRFQIAAVESVYPLIMPYFLPTIFRHGPHL 142

Query: 125 ELCFVPEGDTDDEALREGRLDLRVSN----------TMPVTPEVKVQNLFSTTFVGLARE 174
            +      +     L+ G LD  ++           T+    ++  Q ++      + R 
Sbjct: 143 SISTHAWTEQTFRKLQVGELDFGLTGKDIDINDAKLTLLPPADICEQEIYRDNQRCVVRR 202

Query: 175 DHPLFDEDITAARFASYSHISISRRGIARGPIDTALSAQGLERRVAMIAPGFHGAMFMLP 234
            HP+   D   + + +  H+ +   G  R  +D  L+  G ER +A+  P F+ A  +  
Sbjct: 203 GHPVLQYDWNLSSYLNLRHVQVRCDGNDRWLLDYRLADLGYERDIAITVPDFNSAASLCT 262

Query: 235 DSDLLLPVPKEALLSANRLKLPLRSFALPISLPTLVLAQSWHPRFDKDPAHKWLRETMR 293
            +D +   P        + ++ L    LP+  P +     WH   + DPA +WLRE ++
Sbjct: 263 YTDFIFTAPSHFTHWVAK-QMDLVELPLPMEFPPMAYTLFWHRERENDPALRWLRELIQ 320