Pairwise Alignments

Query, 714 a.a., ATP-dependent DNA helicase DinG from Pseudomonas simiae WCS417

Subject, 646 a.a., ATP-dependent DNA helicase from Vibrio cholerae E7946 ATCC 55056

 Score =  213 bits (541), Expect = 3e-59
 Identities = 183/666 (27%), Positives = 292/666 (43%), Gaps = 97/666 (14%)

Query: 58  VAVEAGTGTGKTVAYSLAAIPTAKAAGKRLVIATATVALQEQIVYKDLPDLMRNSGLNFT 117
           + VEAGTGTGKT AY + A+     +GK+++I+T +  LQEQ+ ++DLP ++   G    
Sbjct: 42  LVVEAGTGTGKTFAYLVPAL----LSGKKVIISTGSKNLQEQLFHRDLPLMVSALGFFGQ 97

Query: 118 FALAKGRGRYMCLSKLDVLLQEGHAQTATAQLFEEEGFKIEVDEASQKLFTSMIE--KLA 175
            AL KGR  Y+CL +L   + E H                   E+   L T +++    A
Sbjct: 98  VALLKGRANYLCLDRLSRQMVESHTP-----------------ESDPTLLTQLVKVRSWA 140

Query: 176 GNKWDGDRDSWPTALEDADWA-RLTTDHSQCTNRHCPNFGQCAFYKAREGMGKVDVIVTN 234
            +   GD        ED+     +T+ +  C  + C ++  C   KAR      DV+V N
Sbjct: 141 SSTQSGDLGECDDLAEDSPIIPTITSTNDNCLGKECASYQDCFVSKARRRAMDADVVVVN 200

Query: 235 HDMVLADLAL---GGGAVLPDPRDTLYVFDEGHHLPDKAIGHFAHYTRLRSTADWLETTA 291
           H + LADLA+   G G ++P+    +++FDE H LPD A  +F      R     ++  A
Sbjct: 201 HHLFLADLAIKETGFGELIPEAE--VFIFDEAHQLPDIASQYFGQSVSSRQ----VQDLA 254

Query: 292 KNLTKLLAQHPLPGDLGKLIEQVPELAREIKTQQQFMFSACEQVADFK-----PGEDVEG 346
           K++           +LG   E     A++++  Q+      +   D +     PG     
Sbjct: 255 KDI-----------ELGYRTE-----AKDMRQLQKVSDKLVQAAMDLRIVLGEPGYRGNW 298

Query: 347 RERPRHRFVGGLIPEHMREMGIELKKGFSRLTDLFTRLTDLLKEGMDGEVNIGIASNQAE 406
           RE  +       +P   RE+         RL +      D+LK  +     +  A  +A 
Sbjct: 299 REVLK-------VPTVAREV--------ERLNEALQFALDVLKLALGRSQLLDTAFERAT 343

Query: 407 EWYPLFGSLLSRSQGNWELWTAFTVEDPEDNPPMARWLTLSESGALFDIEVNASPILAAE 466
                   +   S   +  W         D  P                 ++ +P+  A+
Sbjct: 344 LILGRIRRVCDVSVTGYSYWY--------DTTPR-------------HFSLHITPLSVAD 382

Query: 467 MLRRNLWNVAYGCLVTSATLTALGTFDRFRMRAGLPKKAVTAVVPSPFHHADAGVLRVPD 526
             R  +       + TSATL     F  F  R GL   A  ++V SPF +    VL VP 
Sbjct: 383 KFREQIALKEGAWIFTSATLAVNEDFSHFTERLGLTPSAQFSLV-SPFDYQQQAVLCVPR 441

Query: 527 LKADPRDAAAHTAAIIRDLPELVEGSRGT-LVLFSSRKQMQDVFDGLDRDWRKQVFIQGN 585
              +P  +      ++R L  ++E ++G    L +S   M+D+ +         V +QG 
Sbjct: 442 YLPEPNSSGL-AEKLVRMLAPVIEHNQGRCFFLCTSHSMMRDLGERFRERLTLPVLMQGE 500

Query: 586 LSKQETLNKHKARVDGGDSSVLFGLASFAEGVDLPGAYCEHVVIAKIPFSVPDDPVEAAL 645
            SKQ+TL +         +++L    +F EG+D+ G     V+I K+PF+ PDDP+  A 
Sbjct: 501 TSKQKTLAEFMEL----GNALLVATGAFWEGIDVRGDTLSCVIIDKLPFTAPDDPLLKAR 556

Query: 646 AEWIEARGGNPFMEISVPDASLKLVQACGRLLRTEEDRGTITLLDRRLVTQRYGKAILNA 705
            E    RGG+PF ++ +P+A + L Q  GRL+R + D+G + + D RLVT+ YG   L +
Sbjct: 557 IEDCRLRGGDPFAQVQLPEAVITLKQGVGRLIRDKNDKGALIICDNRLVTRDYGGVFLAS 616

Query: 706 LPPFRR 711
           LPP  R
Sbjct: 617 LPPIPR 622