Pairwise Alignments

Query, 282 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 253 a.a., ABC transporter permease from Methanococcus maripaludis S2

 Score =  116 bits (290), Expect = 6e-31
 Identities = 70/234 (29%), Positives = 122/234 (52%), Gaps = 8/234 (3%)

Query: 35  KGLILVVLAIL-WEVVARYQNNDLLLPSFLQTFHALYD---GLL-SGELLSKVSISLVVL 89
           K L L ++ IL WE +A Y NN ++LP        L +   G+L +G L+    +S+  +
Sbjct: 5   KNLTLPIIGILAWEALAIYLNNPVILPKVESVISILLNPGVGILGTGNLIENTIVSIKRV 64

Query: 90  IKGYLIGIVLAFALTTLAVSTQLGRDLLSTLTSMFNPLPAIALLPLALLWFGLGQNSLIF 149
           + G+ I    A  L  L     L  DL  T   +  P+P +A +PLAL WFG+G++S+ F
Sbjct: 65  LIGFFIAGAFAIPLGLLMGYYSLINDLFDTTVELLRPIPPLAWVPLALAWFGIGESSMHF 124

Query: 150 VLVHSVLWALALNTYSGFLGVSETLRMAGRNYGLKGMRFVLFILIPAALPSILAGLKIGW 209
           ++     + + +NT SG   V   +  A +  G      +  +++PA+ P IL GL++G 
Sbjct: 125 IIFIGAFFPILINTISGVKSVPVIMIEAAKTLGGSTKDILKSVVVPASSPDILTGLRVGA 184

Query: 210 AFAWRTLIAAELVFGATSGKGGLGWYIFQNRNELYTDKVFAGLAVVILIGLLVE 263
             AW  ++AAE++ G+ +G G L  Y +        + V A + ++ +IG++++
Sbjct: 185 GIAWMCVVAAEMLPGSDAGLGYLIMYAYSLSK---MNIVVASMIIIGIIGIILD 235