Pairwise Alignments

Query, 544 a.a., ATP-dependent DNA ligase from Pseudomonas simiae WCS417

Subject, 573 a.a., ATP-dependent DNA ligase from Methanococcus maripaludis S2

 Score =  108 bits (269), Expect = 7e-28
 Identities = 90/327 (27%), Positives = 157/327 (48%), Gaps = 29/327 (8%)

Query: 236 QVEWKWDGIRAQLVKREGRLWIWSRGEELVTERFPELHSLVSGLP-DGTVIDGEIVVW-- 292
           Q E K+DG R Q+ K  G + I+SR  E +T   PEL   +  L  D  +++GE V    
Sbjct: 248 QFETKYDGARVQVHKSNGDVKIYSRRLENITNSVPELVEEIKKLDIDNIILEGECVAMDL 307

Query: 293 -KDTVQPFALLQQRIGRKTLSKKVLEDAPVAVLAYDLLEHQGDDWRNHTQAERR------ 345
                +PF  + +R  RK    K+ E   + +  +D+L +         +  R       
Sbjct: 308 DSGKPRPFQDILRRFRRKYNIDKMAEKIALRIYFFDVLYYNRGLIDTPLKTRREILEKLF 367

Query: 346 ------TQLERVIAQC-NQPVLVASALLTGATWEALAKQREASRSLGVEGMMLKARDGLY 398
                 ++LE++  +  +  +L +S  L       + +    S S+G EG+M+K  D  Y
Sbjct: 368 GTNNWDSELEKIKKEIFSSKMLFSSFKLNSGDPNLVKEFFNWSLSIGHEGIMIKNPDAPY 427

Query: 399 GVG-RTKDMGVWWKWKVDPF--SVDAVLIYAQRGHGRRASLYSDYTFAVWDGPPGSERTL 455
             G R K M     +KV P   ++D V+  A+ G G+R   Y  Y  +V D    ++  L
Sbjct: 428 TPGSRVKTM-----YKVKPTLENLDVVVTRAKIGMGKRKDWYGSYELSVKD----NDGNL 478

Query: 456 VPFAKAYSGLTDEEMRKVDAIVRKTTVEKFGPVSSVTPSMVFELGFEGIALSKRHKSGIA 515
                  SGLT++++ K+  IV +  +E  G    + P +V E+ +E I  S++++ G A
Sbjct: 479 HVIGNVGSGLTEDDLEKLTKIVNEIKIEDLGEEVILEPKIVLEVTYEEIQTSEKYEMGYA 538

Query: 516 VRFPRMLRWRQDKSVEEADNLATLQNL 542
           +RFPR+++ R+DKS+ + + L  ++ +
Sbjct: 539 LRFPRVVQIREDKSINDINTLDDVKKI 565