Pairwise Alignments

Query, 259 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 260 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  176 bits (446), Expect = 4e-49
 Identities = 100/253 (39%), Positives = 144/253 (56%), Gaps = 8/253 (3%)

Query: 3   KALLTLSALALCMAAGSTLAKEYKELRFGVDPSYAPFESKAADGSLVGFDIDLGNAICAE 62
           K  L  +AL     +G T AKE+K +RFG++ +Y PF    ADGSL GFD+D+ NA+CAE
Sbjct: 4   KKWLVATALIATTISGVTQAKEWKTVRFGIEGAYPPFSWTEADGSLKGFDVDMANALCAE 63

Query: 63  LKVKCKWVESDFDGMIPGLKANKFDGVISSMTVTPVREKAIDFSSELFSGPTSLVFKKGA 122
           ++V+CK V  D+DG+IP L A K+D +I++M++T  R+K +DF+ +    P   + KKGA
Sbjct: 64  MQVECKIVPQDWDGIIPSLLARKYDAIIAAMSITEERKKKVDFTGKYAQIPNKFIAKKGA 123

Query: 123 GYS-TPESLKGKSVGYEQGTIQEAYAKAVLDKAGVTTK--AYANQDQVYADLTSGRLDAS 179
             + T E LKG  +G ++ T  + Y   + D  G T     Y + D+ Y DL +GR+ A 
Sbjct: 124 DLAFTKEGLKGVKIGVQRATTHDKY---ITDNYGDTVDIVRYGSFDEAYLDLANGRIAAV 180

Query: 180 VQDMLQAELGFLKSPAGAGYE-VSAAIDDP-LLPSKTAIGIKKGNTELKTLLDKGIKALH 237
           + D    E G L  P G  YE V  ++ DP        I ++K + EL   LD  I AL 
Sbjct: 181 LGDASALEEGMLNKPGGDAYEFVGPSLTDPKWFGEGMGIAVRKQDKELTEKLDAAITALR 240

Query: 238 DDGTYATIQKKHF 250
           + G Y  IQ K+F
Sbjct: 241 EKGIYQQIQAKYF 253