Pairwise Alignments

Query, 242 a.a., amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 229 a.a., L-Arginine ABC transporter, permease protein AotQ (from data) from Pseudomonas fluorescens FW300-N2E2

 Score =  223 bits (568), Expect = 3e-63
 Identities = 109/226 (48%), Positives = 161/226 (71%), Gaps = 1/226 (0%)

Query: 16  LKGFGPLLLQGTWMTIKLSVLSLAVSVLLGLLGASAKLSSLPFLRIPAQLYTTLIRGVPD 75
           LKG+G ++L G W+T++L++ S+A++++LGL+G + +LS + +L     LY T+IRG+PD
Sbjct: 2   LKGYGAVILDGAWLTLELALSSMALAIVLGLIGVALRLSPVRWLAWLGDLYATVIRGIPD 61

Query: 76  LVLMLLIFYSLQTWLTGLTDFMEWE-YIEIDPFSAGVITLGFIYGAYFTETFRGAILAVP 134
           LVL+LLIFY  Q  L  +   + ++ YI+++P +AG+ TLGFI+GAY +ETFRGA +A+P
Sbjct: 62  LVLILLIFYGGQDLLNRVAPMLGYDDYIDLNPLAAGIGTLGFIFGAYLSETFRGAFMAIP 121

Query: 135 RGQLEAATAYGLKRGQRFRYVTFPQMMRFALPGIGNNWMVMLKATALVSIIGLADLVKAA 194
           +GQ EA  AYG+   Q F  V  PQM+R A+PG  NNW+V+ KATAL+S++GL D++  A
Sbjct: 122 KGQAEAGMAYGMNGFQVFFRVLVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFKA 181

Query: 195 QDAGKSTYQLFYFLVLAALIYLLITSASNFVLRRLERRYSAGAREA 240
           + A  +T + F F +  A +YL+ITS S   LR LE+RYS G R A
Sbjct: 182 KQAADATREPFTFFLAVAAMYLVITSVSLLALRHLEKRYSVGVRAA 227