Pairwise Alignments

Query, 236 a.a., amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 225 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  188 bits (478), Expect = 7e-53
 Identities = 101/216 (46%), Positives = 139/216 (64%), Gaps = 5/216 (2%)

Query: 19  HITGLAMTMWLLTTALVIGFLVSIPLSIARVSRKRLVRWPVQFYTYLFRGTPLYIQLLIC 78
           +++GL  T+WL++ +LVIG L +IPL+IAR S+++    P   Y Y  RGTPL +QL + 
Sbjct: 13  YLSGLWTTVWLVSLSLVIGLLCAIPLAIARNSKQKWFSLPAWGYIYFLRGTPLLVQLYLI 72

Query: 79  YTGIYSLAAVREQPLLDAFFRDAMNCTILAFALNTCAYTTEIFAGAIRSMAHGEVEAAKA 138
           Y G+         P+ D  +  A  C ++AF LNT AYT EI  GAI  +  GEVEAAKA
Sbjct: 73  YYGMDQWF-----PVKDTLWEHAWFCALVAFILNTSAYTAEIIRGAINGLPKGEVEAAKA 127

Query: 139 YGLSGWKLYAYVIMPSALRRSLPYYSNEVILMLHSTTVAFTATIPDILKVARDANSATFM 198
           YG+S ++ Y  +I+PSALRRSLP YSNEVI MLH + VA   TI D+   AR  NS  + 
Sbjct: 128 YGMSRFQTYQRIILPSALRRSLPAYSNEVIFMLHGSAVAGIVTIMDLTGAARLVNSRYYA 187

Query: 199 TFQSFGIAALIYLTVTFALVGLFRLAERRWLAFLGP 234
            F++F  A L Y+ +TF ++  F+ AE+R+LA+L P
Sbjct: 188 PFEAFLSAGLFYMALTFIILWCFKQAEQRFLAYLKP 223