Pairwise Alignments

Query, 826 a.a., DEAD/DEAH box helicase from Pseudomonas simiae WCS417

Subject, 863 a.a., Lhr-like helicases from Pseudomonas stutzeri RCH2

 Score = 1209 bits (3129), Expect = 0.0
 Identities = 594/817 (72%), Positives = 695/817 (85%), Gaps = 2/817 (0%)

Query: 8   AKRWFAAKGWKPFAFQKEVWAAVKSGQSGLLHASTGAGKTYALWFAALNRFAIARPPVTA 67
           +++WFA++ W+PF FQ+EVW A+  G+SGLLHA+TG+GKTYA+W  ALNRFA   P    
Sbjct: 9   SEQWFASREWQPFPFQREVWQAIDRGESGLLHATTGSGKTYAVWLGALNRFATKAPRPNT 68

Query: 68  KRKPPAEPLTVLWITPMRALAADTARALEAPLEALQIPWSVGLRTGDTSSSERARQTRRQ 127
             KP   PLTVLWITPMRALAADTARAL+APL  L I WS+GLRTGDTS +ERARQ RR 
Sbjct: 69  TDKPA--PLTVLWITPMRALAADTARALQAPLYDLGINWSIGLRTGDTSGAERARQGRRL 126

Query: 128 PTVLVTTPESLTLMLARADSEVSLAHLRMVVVDEWHELIGNKRGVQLQLALARLRRWHPD 187
           P+ LVTTPESLTL+L RAD+  + A LRM+VVDEWHEL+GNKRGVQLQLALARLR+W P+
Sbjct: 127 PSALVTTPESLTLLLTRADARQAFAGLRMLVVDEWHELLGNKRGVQLQLALARLRQWMPE 186

Query: 188 LMVWGISATLGNQAHALEVLVPQGDGINVQGQTAKQLIIDTLLPPVTERFPWAGHIGLKM 247
           L+VWG+SATLGNQ HAL+VL+  G G  VQG+  K L +DTLLPP  ERFPWAGH+GL+M
Sbjct: 187 LIVWGLSATLGNQPHALDVLLYPGSGRLVQGKVDKDLRVDTLLPPCIERFPWAGHLGLRM 246

Query: 248 LPQVVAEVDASSSCLVFTNTRAQSEIWFQALLDARPDWAGVIALHHGSLSRETRDWVERA 307
           LPQVV E+D++++ LVFTNTR+QSEIW+QALLDARPDWAG+IALHHGSL+RE RDWVE+ 
Sbjct: 247 LPQVVEEIDSAATTLVFTNTRSQSEIWYQALLDARPDWAGLIALHHGSLAREVRDWVEQG 306

Query: 308 LKDGQLKAVVCTSSLDLGVDFLPVERVLQIGSAKGVARLMQRAGRSGHAPGRPSRVTLVP 367
           LK G LKAVVCTSSLDLGVDFLPVERVLQIGS KGVARLMQRAGRSGHAPGR SRVTLVP
Sbjct: 307 LKQGALKAVVCTSSLDLGVDFLPVERVLQIGSPKGVARLMQRAGRSGHAPGRTSRVTLVP 366

Query: 368 THSLELVEAAAAQDAIAQRRIEARESPYKPLDVLVQHLVSMALGGGYKPDDLLVEVRGAW 427
           THS+E+VEAAAAQ AI +RRIEAR +P++PLDVLVQHLVSMALGGG++PD+L  EVR AW
Sbjct: 367 THSVEVVEAAAAQVAIGERRIEARSAPHRPLDVLVQHLVSMALGGGFRPDELFAEVRQAW 426

Query: 428 AYHDLTDEDWAWALGFVRHGGLSLTAYPDYRRVEPDEHGIWRVPDARLARRHRMSVGTIV 487
           +Y DL ++ W WAL FVRHGG SLTAYPDY+RVEPDE G+W+VP  R+A RHRMS+GTIV
Sbjct: 427 SYRDLNEDHWQWALAFVRHGGHSLTAYPDYQRVEPDEAGLWKVPSRRVALRHRMSIGTIV 486

Query: 488 SDASIHLKFWSKGGGGKNLGSVEEGFIARLKPGDGFLFAGRLLELVRVENMTAYVRRSNA 547
           SDAS+ +KFW+KGG G++LG++EEGFIARL+PGD FLF GRLLELVRVENMTAYV R+  
Sbjct: 487 SDASLSVKFWAKGGSGRSLGTIEEGFIARLRPGDNFLFGGRLLELVRVENMTAYVSRATG 546

Query: 548 KKAAVPRWNGGRMPLSNELAQAVVERFDAAAQGHFEGPEMQAVRPLLQTQVRWSGLPTRE 607
           +KAAVPRWNGGRMPLS+ELA AVVE+  AA++GHFE PEM  V PLL+ Q+ WS LPT  
Sbjct: 547 RKAAVPRWNGGRMPLSSELADAVVEQLGAASRGHFESPEMGLVEPLLRVQMDWSALPTET 606

Query: 608 HLLAEALKSREGWHLFLYPFAGRQVHLGLASLLAWRVSQGQAVTFSIAVNDYGLELLSAT 667
            LLAE +KSREGWHLFLYPFAGR VHLGLASLLAWR+ Q + +TFSIAVNDYG ELLSAT
Sbjct: 607 TLLAEVMKSREGWHLFLYPFAGRHVHLGLASLLAWRLGQHRPLTFSIAVNDYGFELLSAT 666

Query: 668 EVNWPALLNEALLSPEHLLEDVVASLNAGELALRRFREIARIAGLVFAGYPGAPKSTRQV 727
           EV+W   L   L S ++LL DV+ASLNAGELA RRFREIARIAGLVF+GYPGA KS RQ+
Sbjct: 667 EVDWMHWLTPELFSEDNLLHDVLASLNAGELARRRFREIARIAGLVFSGYPGAQKSARQL 726

Query: 728 QASSGLFFEVFKQYDPQNLLLTQAGEEVLRDELDIRRLEQTLRHLCALKLELHRIQRPTP 787
           QASSGLFF+VF+QYDP NLLLTQA EEVLR EL++ RL+QTL+ L   +L++H+++R TP
Sbjct: 727 QASSGLFFDVFRQYDPANLLLTQAEEEVLRQELEVERLQQTLQRLQQRQLDIHQVKRTTP 786

Query: 788 LAFPLLVERMRESMSSEKLSERIARMVKDLEKVADNG 824
           LAFPL+VER RESMSSEKL++RI RMV +L+K A  G
Sbjct: 787 LAFPLMVERFRESMSSEKLADRIRRMVAELDKAAGPG 823