Pairwise Alignments

Query, 826 a.a., DEAD/DEAH box helicase from Pseudomonas simiae WCS417

Subject, 432 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score = 66.2 bits (160), Expect = 4e-15
 Identities = 87/348 (25%), Positives = 153/348 (43%), Gaps = 31/348 (8%)

Query: 23  QKEVWAAVKSGQSGLLHASTGAGKTYALWFAALNRFAIARPPVTAKRKPPAEPLTVLWIT 82
           QKE   A++ GQ  L  A TG GKT A     L +     P  T +    A     L + 
Sbjct: 28  QKEAIPAIRRGQDVLASAQTGTGKTAAFALPILQKM-FDSPSDTQRSNTRA-----LILA 81

Query: 83  PMRALAADTARALEAPLEALQIPWSVGLRTGDTSSSERARQTRRQPTVLVTTPESLTLML 142
           P R L A  A  ++    +  +P SV    G      +A + ++   ++V TP  L   L
Sbjct: 82  PTRELVAQVADNIKQ--YSRYLPISVLTVYGGVKMDTQAAKVKKGADIIVATPGRLLEHL 139

Query: 143 ARADSEVSLAHLRMVVVDEWHELIGNKRGVQLQLALARLRRWHPDLMVWGISATLGNQAH 202
              +  ++L+++  +V+DE   ++       +Q  L ++ R   +L+    SAT  +   
Sbjct: 140 QACN--LNLSNVDFLVLDEADRMLDMGFITDIQKILQQVNRDRQNLL---FSATFSSAVK 194

Query: 203 AL--EVLV-PQGDGINVQGQTAKQLIIDTLLPPVTERFPWAGHIGLKMLPQVVAEVDASS 259
            L  E+LV P+   ++ Q  TA  + +  ++ PV +R         ++L +++ + +   
Sbjct: 195 QLANEMLVKPKLIAVDKQNTTA--VTVSQVVYPVEQRRK------RELLSELIGKKNWQQ 246

Query: 260 SCLVFTNTRAQSEIWFQAL-LDARPDWAGVIALHHGSLSRETRDWVERALKDGQLKAVVC 318
             LVFT TR  +++  + L LD  P      A+ H   ++  R    R  K+G+++A+V 
Sbjct: 247 -VLVFTATREAADVLVKELNLDGIPS-----AVVHSEKAQGNRRRALREFKEGKVRALVA 300

Query: 319 TSSLDLGVDFLPVERVLQIGSAKGVARLMQRAGRSGHAPGRPSRVTLV 366
           T     G+D   +E V+           + R GR+G A      ++LV
Sbjct: 301 TEVAARGLDIPELEYVVNFDLPFLAEDYVHRIGRTGRAGRTGVAISLV 348