Pairwise Alignments

Query, 826 a.a., DEAD/DEAH box helicase from Pseudomonas simiae WCS417

Subject, 759 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

 Score = 78.6 bits (192), Expect = 1e-18
 Identities = 100/377 (26%), Positives = 161/377 (42%), Gaps = 33/377 (8%)

Query: 6   DFAKRWFAAKGWKPFAFQKEVWAAVKSGQSGLLHASTGAGKTYALWFAALNRFAIARPPV 65
           D  + +   K  K +  Q      V+ G++ LL  ST +GKT +     L          
Sbjct: 48  DNFEEYLLKKNKKLYTHQYSALENVRIGKNILLTTSTASGKTLSFNLPILE--------- 98

Query: 66  TAKRKPPAEPLTVLWITPMRALAADTARALEAPLEALQIPWSVGLRTGDTSSSERARQTR 125
           T +    A   T L+I P +AL  D    L+     L I     +  GDT +S+R +  R
Sbjct: 99  TLQNDKDA---TALYIYPTKALTNDQLNNLKNLENELNITLKPEIYDGDTPNSKR-KSIR 154

Query: 126 RQPTVLVTTPESLTLMLARADSEVSL-AHLRMVVVDEWHELIGNKRGVQLQLALARLRRW 184
            +  +++T P  L  +L      +S   +L+ +V+DE H   G   G  +   + RLRR 
Sbjct: 155 EKSRIILTNPHELHQVLQYNPKWMSFFKNLKYIVIDEAHTYRGIF-GSNISFLIRRLRRI 213

Query: 185 HPDLMVWG----ISATLGNQAHALEVLVPQGDGINVQGQTAKQ----LIIDTLLPPVTER 236
             D   +      SATL N     E LV     +  +  + K     +  +TL   ++E 
Sbjct: 214 CEDYGSYPQFILASATLANAKEFSEKLVGLDFRVIDKDGSPKNKKYFVFYNTLKNEISES 273

Query: 237 FPWAGHIGLKMLPQVVAEVDASSSCLVFTNTRAQSE---IWFQALLDARPDWAGVIALHH 293
             ++  I +  L      +      + FT +R  +E   IW +  L        + +   
Sbjct: 274 SWYSSAINILELC-----MKYGLQTIGFTLSRKMAELITIWTKKSLGNNILSRKISSYRS 328

Query: 294 GSLSRETRDWVERALKDGQLKAVVCTSSLDLGVDFLPVERVLQIGSAKGVARLMQRAGRS 353
           G    E RD +E  LK+G L+AV  T++L++G+D   ++ V+  G    +  L Q+AGR+
Sbjct: 329 GFTPEERRD-IESRLKNGDLRAVTSTNALEVGIDIGSLDSVIMYGYPGTLMSLWQQAGRA 387

Query: 354 GHAPGRPSRVTLVPTHS 370
           G A G  S VTL+   S
Sbjct: 388 GRA-GYDSVVTLLSRES 403