Pairwise Alignments

Query, 278 a.a., peptigoglycan-binding protein LysM from Pseudomonas simiae WCS417

Subject, 372 a.a., lipoprotein NlpD from Klebsiella michiganensis M5al

 Score =  193 bits (491), Expect = 4e-54
 Identities = 116/283 (40%), Positives = 159/283 (56%), Gaps = 41/283 (14%)

Query: 37  SGARVVDRNNAVPQKPTVTTGQ-YVVRKGDTMFSIAFRYGWDYKALAARNNIPVPYTIHP 95
           +G  V +R      K + T G  Y V++GDT+F IA+  G D++ LA RNNIP PY ++ 
Sbjct: 90  NGKIVYNRKYGDIPKGSYTGGSTYTVKRGDTLFYIAWVTGNDFRDLAQRNNIPAPYGLNV 149

Query: 96  GQTIRFDGRTGSTPT--------TVVTNTGS--SPSSSSKTTII--TRPAGTAKPASAAK 143
           GQT++    +G   T        +V  + G   + +S+ K+T +  ++P  T   +S  +
Sbjct: 150 GQTLQVGNASGQPITGDNPVAQASVKASNGGMLTANSAQKSTAVVASQPTITYSESSGEQ 209

Query: 144 PAPAPLPPAGPAPT----------------------------GWGWPSNGVLIGKFSSNG 175
            A   LP   PA T                             W WP++G +I  FS   
Sbjct: 210 SANKMLPNNKPATTTAVAPVTAPAVSTTQSTASSTSTSSPISSWRWPTDGKVIENFSGAE 269

Query: 176 SLNKGIDIAGDLGQPVLAASDGTVVYAGSGLRGYGELVIIKHSDTYVSAYGHNRRLLVRE 235
             NKGIDIAG  GQ ++A +DG VVYAG+ LRGYG L+IIKH+D Y+SAY HN  +LV+E
Sbjct: 270 GGNKGIDIAGSKGQAIVATADGRVVYAGNALRGYGNLIIIKHNDDYLSAYAHNDTMLVKE 329

Query: 236 GQQVKVGQTIAEMGSTGTDRVKLHFEIRRQGKPVDPLQFLPRR 278
            Q +K GQ IA MGSTGT   +LHFEIR +GK V+PLQ+LP+R
Sbjct: 330 QQDIKAGQKIATMGSTGTSSTRLHFEIRYKGKSVNPLQYLPQR 372