Pairwise Alignments

Query, 278 a.a., peptigoglycan-binding protein LysM from Pseudomonas simiae WCS417

Subject, 333 a.a., peptidoglycan DD-metalloendopeptidase family protein from Dyella japonica UNC79MFTsu3.2

 Score =  196 bits (499), Expect = 4e-55
 Identities = 115/282 (40%), Positives = 149/282 (52%), Gaps = 61/282 (21%)

Query: 57  GQYVVRKGDTMFSIAFRYGWDYKALAARNNIPVPYTIHPGQTIRFDGRTGSTPTTVVTNT 116
           G Y V KGDT++SIAFR G D++ LA+ N I  PYTI PGQT++      + P       
Sbjct: 53  GSYRVVKGDTLYSIAFRNGVDFRDLASWNGIAAPYTIWPGQTLKLSASGAAAPAASHAVV 112

Query: 117 GSSPSSSSKT-----------TIITRPAGTAK-----PASAAKPAPAPLPPAGPAPTG-- 158
            +SP  ++             T+   PA TA+     PA+  KPAPA    + PAP    
Sbjct: 113 ATSPKPAANPPARTPAGAGFETVPANPAATAETPAPAPAAPVKPAPATATVSAPAPASTA 172

Query: 159 ------------------------------------------WGWPSNGVLIGKFSSNGS 176
                                                     W WP++G L GK   +G 
Sbjct: 173 VTVVPVAGAPATAHTAAAAATPPPAPPQAVAQGATRASAGINWRWPADGSL-GKRFQSGD 231

Query: 177 LNKGIDIAGDLGQPVLAASDGTVVYAGSGLRGYGELVIIKHSDTYVSAYGHNRRLLVREG 236
              GI+I G  G P+ AA+DG VVY+G+GL GYGELVIIKH+D+++SAYGHN + LV+EG
Sbjct: 232 AIPGIEILGKSGDPIRAAADGVVVYSGNGLVGYGELVIIKHNDSFLSAYGHNSKRLVKEG 291

Query: 237 QQVKVGQTIAEMGSTGTDRVKLHFEIRRQGKPVDPLQFLPRR 278
           Q+V  GQ IAEMGSTG  R +L F+IRR G PVDP+ +LP R
Sbjct: 292 QRVSAGQQIAEMGSTGATRDELQFQIRRDGNPVDPMGYLPSR 333