Pairwise Alignments

Query, 278 a.a., peptigoglycan-binding protein LysM from Pseudomonas simiae WCS417

Subject, 315 a.a., lipoprotein NlpD from Paraburkholderia bryophila 376MFSha3.1

 Score =  184 bits (467), Expect = 2e-51
 Identities = 124/312 (39%), Positives = 161/312 (51%), Gaps = 41/312 (13%)

Query: 1   MSLTGLAQRMSKTSFHRLVLGLVFSSVLVGCSSSPSSGARVVDRNN-------AVPQKPT 53
           M  T L   MS T   R V  L  S ++  C+S     A VVDR+        A  Q P 
Sbjct: 7   MQRTSLNIPMSVTQ--RSVCVLALSLLMTACASRLDQ-APVVDRSGGNVLSTQAAQQSPV 63

Query: 54  VT----TGQYVVRKGDTMFSIAFRYGWDYKALAARNNIPVPYTIHPGQTIRF--DGRTGS 107
                  G Y V+ GDT++ IA   G +Y+ ++A NN+  P  I   Q +R    G   +
Sbjct: 64  PLGPPPPGYYRVKPGDTLYRIALENGQNYRDISAWNNLTNPNQIEVDQLLRVVPPGANTA 123

Query: 108 TPTTVVTNT--------------GSSPSSSSKTTIITRPAGTAKPASAAKPAPAPLPPAG 153
             T  VT                G+SPS+     +   P       +AA   P+    AG
Sbjct: 124 ALTPGVTTAPIGSTGAVQGAPLNGTSPSAGGAAGVAAPPIYGTTANNAALTPPSSTGAAG 183

Query: 154 PAP---------TGWGWPSNGVLIGKFSSNGSLNKGIDIAGDLGQPVLAASDGTVVYAGS 204
            A            + WP  G L+G F  N S NKG++I G  G  V A++DG VVYAG+
Sbjct: 184 AASDSSAGASGNVNFAWPVRGPLLGTF--NDSTNKGVNIGGAAGDAVKASADGRVVYAGN 241

Query: 205 GLRGYGELVIIKHSDTYVSAYGHNRRLLVREGQQVKVGQTIAEMGSTGTDRVKLHFEIRR 264
           GLRGYG L+IIKH  TY++AY HNR L+V+EG  V  GQ IAEMG++ +DRV LHFE+RR
Sbjct: 242 GLRGYGNLIIIKHDATYLTAYAHNRSLMVKEGDAVTKGQKIAEMGNSDSDRVMLHFEVRR 301

Query: 265 QGKPVDPLQFLP 276
           QGKPVDPL++LP
Sbjct: 302 QGKPVDPLKYLP 313