Pairwise Alignments

Query, 278 a.a., peptigoglycan-binding protein LysM from Pseudomonas simiae WCS417

Subject, 298 a.a., peptidase M23B (RefSeq) from Shewanella sp. ANA-3

 Score =  192 bits (488), Expect = 7e-54
 Identities = 120/293 (40%), Positives = 164/293 (55%), Gaps = 32/293 (10%)

Query: 18  LVLGLVFSSVLVGCSSSPSSGARVVDRNNAVPQ--KPTVTTGQYVVRKGDTMFSIAFRYG 75
           L+L L    +L GCS   S  A V   +++  +  K  + +  Y V+KGDT++SI++  G
Sbjct: 6   LLLNLSLVLLLAGCSFQASRPAPVESLSHSYSKHNKGHIKSNSYKVKKGDTLYSISWAAG 65

Query: 76  WDYKALAARNNIPVPYTIHPGQTIRFD---GRTGSTPTTV---------------VTNTG 117
            D+  +A  N +   YTI+PGQ +      G+ G   TT+               V    
Sbjct: 66  KDFAEIAKINQLDKSYTIYPGQILYLTNDRGQNGKGSTTLGGSNSASKGQNKANSVDKQS 125

Query: 118 SSPSSSSKTTIITRPAGT----AKPASAAKPAPAPLPPAGPAPTG--------WGWPSNG 165
           +S +SS+K     +   T    AKPA +A  +   + P+  APT         W WP  G
Sbjct: 126 ASNNSSAKNLSSEQQKKTLDQKAKPAYSATSSQQSINPSIVAPTSTLPDSVSQWQWPVRG 185

Query: 166 VLIGKFSSNGSLNKGIDIAGDLGQPVLAASDGTVVYAGSGLRGYGELVIIKHSDTYVSAY 225
            LIG +S+N   NKGI IAG  G  + AA+DG VVYAGS LRGYG LVIIKHSD Y+SAY
Sbjct: 186 KLIGTYSANEQGNKGIKIAGKRGDIIKAAADGRVVYAGSALRGYGNLVIIKHSDDYLSAY 245

Query: 226 GHNRRLLVREGQQVKVGQTIAEMGSTGTDRVKLHFEIRRQGKPVDPLQFLPRR 278
            H  ++LV E Q V  GQT+A+MGSTGT++V L FEIR  G+ V+PL +LP++
Sbjct: 246 AHADQILVEEKQHVLAGQTVAKMGSTGTNQVMLRFEIRYHGQSVNPLNYLPKQ 298