Pairwise Alignments

Query, 1173 a.a., DNA polymerase III subunit alpha from Pseudomonas simiae WCS417

Subject, 1173 a.a., DNA polymerase III, alpha subunit from Pseudomonas syringae pv. syringae B728a

 Score = 2149 bits (5567), Expect = 0.0
 Identities = 1062/1173 (90%), Positives = 1125/1173 (95%)

Query: 1    MPASFVHLRLHTEYSLVDGLVRIKPLVKTLVGMNMPAVAVTDQNNMCSLVKFYKNAMGAG 60
            MPASFVHLRLHTEYSLVDGLVR+KPL+K L GMNMPAVAVTDQNNMCSLVKFYK A G+G
Sbjct: 1    MPASFVHLRLHTEYSLVDGLVRVKPLIKALTGMNMPAVAVTDQNNMCSLVKFYKAAQGSG 60

Query: 61   IKPICGADLWLSNKDPDNPLSRISLLAMNGVGYRNLTELISRGFIDGQRNGSIIIEREWV 120
            IKPICG DLWL+ +D D  LSRISLLAMN  GYRNLTELISRGFI+GQRNG I+I+R+WV
Sbjct: 61   IKPICGVDLWLAGRDEDAALSRISLLAMNAQGYRNLTELISRGFIEGQRNGQIVIQRQWV 120

Query: 121  AEASEGLIMLSAAKEGEIGIALLGGNPQEAEVLAKEWMQVFPDRFYLEVQRTNRPNDEEH 180
            A+ASEG+I LSAAKEGEIG+ALLGGNP EA+ L +EW++VFPDRFY+EVQRTNR NDEEH
Sbjct: 121  AQASEGVIALSAAKEGEIGMALLGGNPGEADELLREWLEVFPDRFYIEVQRTNRANDEEH 180

Query: 181  LHAAVALADKLGAPLVATNDVRFIKKEDFEAHETRVCIGEGRALDDPRRSKNYSEEQYLK 240
            LHAAVALA++ GAPLVATNDVRFIK+ DFEAHETRVCIGEGRALDDPRRS NYS++QYLK
Sbjct: 181  LHAAVALAERHGAPLVATNDVRFIKQADFEAHETRVCIGEGRALDDPRRSHNYSDQQYLK 240

Query: 241  SAEEMAELFSDLPEALENSVEIAKRCNIEVKLGKHFLPNFPIPDGMTIDEYFRKVSFDGL 300
            S EEMAELFSDLPEALEN+VEIAKRCNI+VKLG HFLPNFPIPDGMTIDEYFRKVSFDGL
Sbjct: 241  SPEEMAELFSDLPEALENTVEIAKRCNIDVKLGTHFLPNFPIPDGMTIDEYFRKVSFDGL 300

Query: 301  EERLSVLLPKDTTEDYEAKRQVYVDRLNFELDIIIQMGFPGYFLIVMDFIQWAKNNGVPV 360
            EERL+VLLPKDTTEDYEAKRQVYVDRLNFELDIIIQMGFPGYFLIVMDFIQWAK+NGVPV
Sbjct: 301  EERLAVLLPKDTTEDYEAKRQVYVDRLNFELDIIIQMGFPGYFLIVMDFIQWAKSNGVPV 360

Query: 361  GPGRGSGAGSLVAYVQKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIEYV 420
            GPGRGSGAGSLVAYVQKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIEYV
Sbjct: 361  GPGRGSGAGSLVAYVQKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIEYV 420

Query: 421  AEKYGRNAVSQIITFGSMAAKAVIRDVARVQGKSYGLADRLSKMIPFEVGMTLEKAYEQE 480
            AEKYGRNAVSQIITFGSMAAKAV+RDVARVQGKSYGLADRLSKMIPFEVGMTLEKAYEQE
Sbjct: 421  AEKYGRNAVSQIITFGSMAAKAVVRDVARVQGKSYGLADRLSKMIPFEVGMTLEKAYEQE 480

Query: 481  EILRDFIKIDEEAAEIWDMARKLEGVVRNVGKHAGGVVIAPTKLTDFSPIYCDEEGGGLV 540
            EILRDF+K+DEEAAEIW+MA KLEG+VRNVGKHAGGVVIAPTKLTDFSPIYCDE G GLV
Sbjct: 481  EILRDFLKVDEEAAEIWEMALKLEGIVRNVGKHAGGVVIAPTKLTDFSPIYCDEAGDGLV 540

Query: 541  TQFDKDDVEAAGLVKFDFLGLRTLTIIDWALKTINRDRAKVNEEPLDIAFIPLDDKPTYT 600
            TQFDKDDVEAAGLVKFDFLGLRTLTIIDWALKTINRDRAKVNEEPLDIAFIPLDD PTY 
Sbjct: 541  TQFDKDDVEAAGLVKFDFLGLRTLTIIDWALKTINRDRAKVNEEPLDIAFIPLDDMPTYQ 600

Query: 601  LLQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGR 660
            LLQ+AETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGR
Sbjct: 601  LLQRAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGR 660

Query: 661  AELAYPHSDYQYEGLKPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPE 720
            AEL+YPH DYQYEGLKPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPE
Sbjct: 661  AELSYPHVDYQYEGLKPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPE 720

Query: 721  EMAKQRGGFIEGCATNNIDADLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKAHY 780
            EMAKQRGGFI+GC TNNID DLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLK HY
Sbjct: 721  EMAKQRGGFIDGCKTNNIDPDLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKTHY 780

Query: 781  PAPFMAAVLSADMHNTDKVVTLIEEVRTMKLRLDAPDVNASEFKFTVNDEGRIIYGLGAI 840
            PAPFMAAVLSADMHNTDKVVTLIEEVRTMKLRLDAPDVN SEFKFTV+D+GRI+YGLGAI
Sbjct: 781  PAPFMAAVLSADMHNTDKVVTLIEEVRTMKLRLDAPDVNTSEFKFTVSDDGRILYGLGAI 840

Query: 841  KGVGEGPVEAITEARQDGPFKDLFDFCARVDLKRINKRTLDGLIRSGALDRLGPYFHDEP 900
            KGVGEGPVEAIT+ARQ+GPFKDLFDFCARVDLKR+NKRTLDGLIRSGALDRLGPYF  EP
Sbjct: 841  KGVGEGPVEAITDARQNGPFKDLFDFCARVDLKRVNKRTLDGLIRSGALDRLGPYFELEP 900

Query: 901  KAYQANIDRNRAVLLTAMEEAIKAAEQTARTHDSGHADLFGGLFVEEDADVYGNHRKAKE 960
            KAYQANIDRNR+VLL A+EEAI+AAEQTAR+ DSGH+DLFGGLFVE DADVY NHRK +E
Sbjct: 901  KAYQANIDRNRSVLLAALEEAIQAAEQTARSRDSGHSDLFGGLFVEADADVYANHRKTRE 960

Query: 961  LTLKERLKGEKDTLGLYLTGHPIDEYEGEIRRFARQRIIDLKPARDTQTVAGMIIALRVM 1020
            L+LK+RL+GEK+TLGLYLTGHPIDEYEGEIRRFARQRIIDLKPARDTQTVAG+IIALRVM
Sbjct: 961  LSLKDRLRGEKETLGLYLTGHPIDEYEGEIRRFARQRIIDLKPARDTQTVAGLIIALRVM 1020

Query: 1021 KNKKGDKMGFITLDDRSGRIEASLFADAFHSAQSLLQTDAMVVVEGEVSNDDFSGGLRLR 1080
            KNKKGDKMGFITLDDRS RIEASLFA+AFHSAQSLLQTDAMVVVEGEVSNDDFSGGLRLR
Sbjct: 1021 KNKKGDKMGFITLDDRSARIEASLFAEAFHSAQSLLQTDAMVVVEGEVSNDDFSGGLRLR 1080

Query: 1081 IKRVMSMEDARTNLAESLRLKVKTEALKGDQLRWLGELLKRHRGACPVTMEYTGSDAKAM 1140
             KRVMS+EDARTNLAESLR+ V+ EALKGD+LRWLG+L KRHRGACP+T++YTG DA+A+
Sbjct: 1081 AKRVMSIEDARTNLAESLRVTVRAEALKGDRLRWLGDLCKRHRGACPITVDYTGQDARAL 1140

Query: 1141 LQFGETWRIDPADGLIQALRDQFGRDNVFLQYR 1173
            LQ GE WRIDPAD LIQALRDQFGR+NVFLQYR
Sbjct: 1141 LQLGEAWRIDPADSLIQALRDQFGRENVFLQYR 1173