Pairwise Alignments

Query, 1173 a.a., DNA polymerase III subunit alpha from Pseudomonas simiae WCS417

Subject, 1127 a.a., DNA polymerase III subunit alpha from Phaeobacter inhibens DSM 17395

 Score =  313 bits (801), Expect = 7e-89
 Identities = 250/861 (29%), Positives = 413/861 (47%), Gaps = 56/861 (6%)

Query: 12  TEYSLVDGLVRIKPLVKTLVGMNMPAVAVTDQNNMCSLVKFYKNAMGAGIKP-------- 63
           T+++ + G+VR    +K L      A+ +  Q+ + S  +       A  KP        
Sbjct: 64  TDHNSLAGVVRAWSALKELKRDPQDALKIRSQHQVDSSSRQEIGHTSALPKPTTPIFPKL 123

Query: 64  ICGADLWLSNKDPDNPLSRISLLAMNGVGYRNLTELISRGFIDGQRNGSIIIEREWVAEA 123
           I G  L L N   D        L  +   Y+ L  L++ G    ++ G  ++  E + +A
Sbjct: 124 IVGCRLILQNCAVD-----WIALPCDRSAYKRLARLLTLGKRRAEK-GQCLLYAEDMIDA 177

Query: 124 SEGLIMLSAAKEGEIGIALLGGNPQEAEVLAKEWMQVFPDRFYLEVQRTNRPNDEEHLHA 183
            +G+I+++  KE       L     + + + ++    FP+  +L        +D+ +L A
Sbjct: 178 CKGMILIALPKE------TLSNAVSDIQKIGRQ----FPNHVFLGATPRYDGSDQAYLAA 227

Query: 184 AVALADKLGAPLVATNDVRFIKKEDFEAHETRVCIGEGRALDDPRRSKNYSEEQYLKSAE 243
              LA    AP+VA  DV   +    +  +   C+ E   +DD       + E+ LK+  
Sbjct: 228 CAKLAQTTCAPMVAVGDVLMHRANRRQLADVLTCMRENINIDDIGTRALPNAERRLKAGA 287

Query: 244 EMAELFSDLPEALENSVEIAKRCNIEVKLGKHFLPNFPIPDGMTIDEYFRKVSFDGLEER 303
           +MA +F D P AL  + EIA RCN ++    +  P+    +G T  +   +++ +GL+ R
Sbjct: 288 DMARIFRDHPAALRRTAEIANRCNFDLSELSYEYPHEEA-EGETPQDRLERLAREGLKRR 346

Query: 304 LSVLLPKDTTEDYEAKRQVYVDRLNFELDIIIQMGFPGYFLIVMDFIQWAKNNGVPVGPG 363
                  D   D   K       +  EL  +  + FP YFL V D +Q+A++ G+ +  G
Sbjct: 347 YP-----DGPPDRAIKL------MEKELSAVKDLEFPAYFLTVHDIVQFARSKGI-LCQG 394

Query: 364 RGSGAGSLVAYVQKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIEYVAEK 423
           RGS A S++ Y+  ITD+ P    ++FERF++  R   PD DVDF  + R+ VI+++ +K
Sbjct: 395 RGSAANSILCYLLGITDVSPDMIAMVFERFVSKHRGEPPDIDVDFEHERREEVIQWIYQK 454

Query: 424 YGRNAVSQIITFGSMAAKAVIRDVARVQGKSYGLADRLSKMIPFEVGMTLEKAYEQEEIL 483
           YGR+      T      +A IR+V +V G S  +   LS  I    GM+   + + E I 
Sbjct: 455 YGRHRAGLCATVIHFRTRAAIREVGKVMGLSQDVTAGLSGQI---WGMS-NGSVDLERIR 510

Query: 484 RDFIKI-DEEAAEIWDMARKLEGVVRNVGKHAGGVVIAPTKLTDFSPIYCDEEGGGLVTQ 542
              + + D    +   +  ++ G  R++ +H GG VI   +L + +PI         V  
Sbjct: 511 ELGLNLEDRRLMQTIRLIGEIIGFPRHLSQHVGGFVITSGRLDELAPIENAAMENRTVIC 570

Query: 543 FDKDDVEAAGLVKFDFLGLRTLTIIDWALKTINRDRAKVNEEPLDIAFIPLDDKPTYTLL 602
           +DKDD++A  ++K D L L  LT I  A   + +     +     IA IP  D+ TY +L
Sbjct: 571 WDKDDIDALRILKVDILALGMLTCIRKAFALMQQHENITH----SIATIPQKDEATYDML 626

Query: 603 QKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGRAE 662
             A+   VFQ+ESR     + +++P    DL+  VA+ RPGP+Q  MV  +I R++G  +
Sbjct: 627 CAADAVGVFQVESRAQMNFLPRMRPREFYDLVIEVAIVRPGPIQGDMVRPYIRRRNGLEK 686

Query: 663 LAYPHSDYQYEGLKPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGK-KKPEE 721
                 D     L+ V   T G+ L+QEQ +QIA V AG++   AD LRR++   ++   
Sbjct: 687 -----PDPFGPQLEQVTRRTKGVPLFQEQALQIAVVGAGFSAEEADHLRRSLASFRRMGT 741

Query: 722 MAKQRGGFIEGCATNNIDADLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKAHYP 781
           ++K R  FI G   N    ++A   F  +E FA YGF +SH+AA+ +++Y +AWLK H+P
Sbjct: 742 ISKYRDKFIAGMLKNKYSREIAERCFGQIEGFADYGFPESHAAAFAMLAYVSAWLKCHHP 801

Query: 782 APFMAAVLSADMHNTDKVVTLIEEVRTMKLRLDAPDVNASEFKFTV--NDEGRIIYGLG- 838
           A F  A+L++          ++ +VR   + +    VN S++  ++    +G +   LG 
Sbjct: 802 AIFACALLNSQPMGFYAPAQIVRDVRDHGIEVRPICVNQSQWDNSLERRPDGTLALRLGF 861

Query: 839 -AIKGVGEGPVEAITEARQDG 858
             IKG  E     I  AR +G
Sbjct: 862 RQIKGFKEDDTGWIIAARGNG 882