Pairwise Alignments

Query, 1173 a.a., DNA polymerase III subunit alpha from Pseudomonas simiae WCS417

Subject, 1170 a.a., DNA polymerase III subunit alpha from Phaeobacter inhibens DSM 17395

 Score =  782 bits (2019), Expect = 0.0
 Identities = 481/1192 (40%), Positives = 681/1192 (57%), Gaps = 91/1192 (7%)

Query: 5    FVHLRLHTEYSLVDGLVRIKPLVKTLVGMNMPAVAVTDQNNMCSLVKFYKNAMGAGIKPI 64
            F+HLR HTEYSL++G +R+K L        MPA+AVTD NN+ + ++F   A GAG++PI
Sbjct: 7    FIHLRTHTEYSLLEGALRLKKLPDLCKKHEMPAIAVTDSNNLFAALEFSVAASGAGVQPI 66

Query: 65   CGADLWLSNKDPD-----NPLSRISLLAMNGVGYRNLTELISRGFIDGQRNGSII--IER 117
             G  + L   +P       P + + LLA +  GY +L +L S  ++   R GS +  +  
Sbjct: 67   MGCQVDLRFTEPTPGERPKPPAPLVLLAQSETGYEHLMKLNSCLYM---REGSELAHVTL 123

Query: 118  EWVAEASEGLIMLSAAKEGEIGIALLGGNPQEAEVLAKEWMQVFPDRFYLEVQRTNRPND 177
            E +A  SE +I LS   +G +G  L  G    AE L +    +FPDR Y+E+QR    + 
Sbjct: 124  EELAAHSEDVICLSGGPDGPVGRLLQMGQRPAAEALMQRLKAMFPDRLYVELQRHPGEHG 183

Query: 178  EEHLHAA-----VALADKLGAPLVATNDVRFIKKEDFEAHETRVCIGEGRALDDPRRSKN 232
            +     A     V +A  +  PLVATNDV F   E +EAH+  +CI EG  +D     + 
Sbjct: 184  QPEAEQATERGHVEMAYAMDLPLVATNDVYFPNTEMYEAHDAMICIAEGAYVDQAEPRRR 243

Query: 233  YSEEQYLKSAEEMAELFSDLPEALENSVEIAKRCNIEVKLGKHFLPNFPIPDGMTIDEYF 292
             + + Y KS EEM  LF+DLPEA+EN+VEIAKRC          LP F   +   +    
Sbjct: 244  LTAQHYFKSQEEMVALFADLPEAIENTVEIAKRCAFMAYRRDPILPKFADDEVAEL---- 299

Query: 293  RKVSFDGLEERLSVLLPKDTTEDYEAKRQVYVDRLNFELDIIIQMGFPGYFLIVMDFIQW 352
            R+++ +GL++RL+V+    + EDY+       +RL+FEL II  MGFPGYFLIV DFIQW
Sbjct: 300  RRIANEGLQQRLAVIPHAVSVEDYQ-------ERLDFELGIIEGMGFPGYFLIVADFIQW 352

Query: 353  AKNNGVPVGPGRGSGAGSLVAYVQKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDG 412
            AK++ +PVGPGRGSGAGSLVAY   ITDLDPL Y LLFERFLNPERVSMPDFD+DFCMD 
Sbjct: 353  AKDHDIPVGPGRGSGAGSLVAYALTITDLDPLRYSLLFERFLNPERVSMPDFDIDFCMDR 412

Query: 413  RDRVIEYVAEKYGRNAVSQIITFGSMAAKAVIRDVARVQGKSYGLADRLSKMIPFE--VG 470
            R+ VI+YV EKYGR+ V QIITFG++ +KA +RD+ RV    YG  DRLSK+IP E    
Sbjct: 413  REEVIKYVQEKYGRDKVGQIITFGALLSKAAVRDMGRVLQMPYGQVDRLSKLIPVEGVKP 472

Query: 471  MTLEKAYEQEEILRDFIKIDEEAAEIWDMARKLEGVVRNVGKHAGGVVIAPTKLTDFSPI 530
            M++  +  +E  LR+  + +E    +     ++EG++R+ G HA GVVI    L    P+
Sbjct: 473  MSIVDSLREEPRLREEAENEEVVDRLLKYGMQVEGLLRSAGTHAAGVVIGDRPLDALVPL 532

Query: 531  YCDEEGGGLVTQFDKDDVEAAGLVKFDFLGLRTLTIIDWALKTINR---------DRAKV 581
            Y D       TQF+   VE AGLVKFDFLGL+TLT+I  A+  I +         D  ++
Sbjct: 533  YRDPRSDMPATQFNMKWVEQAGLVKFDFLGLKTLTVIQNAMDLIFQSGRDLHVAADGTQL 592

Query: 582  NEEP----LDIAFIPLDDKPTYTLLQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALV 637
             + P      I  IPLDD  TY L  +A+T AVFQ+ES GM + +K++KP C+ED++ALV
Sbjct: 593  YDPPEGAENQINAIPLDDTVTYDLYSRAKTVAVFQVESTGMMDALKRMKPTCIEDIVALV 652

Query: 638  ALFRPGPLQSGMVDDFINRKHGRAELAYPHSDYQYEGLKPVLAPTYGIILYQEQVMQIAQ 697
            AL+RPGP+++  V   +     + +  +P  D+       +L  T GII+YQEQVMQIAQ
Sbjct: 653  ALYRPGPMENIPVYCEVKNGLRKIQSVHPLIDH-------ILEETQGIIVYQEQVMQIAQ 705

Query: 698  VMAGYTLGGADMLRRAMGKKKPEEMAKQRGGFIEGCATNNIDADLAGNIFDLVEKFAGYG 757
            VMA YTLGGAD+LRRAMGKK  E M  +R  F +G A N + A  A  +FDL+EKFA YG
Sbjct: 706  VMANYTLGGADLLRRAMGKKIKEAMDAERPKFEKGAAENGVPAKKASEVFDLLEKFANYG 765

Query: 758  FNKSHSAAYGLVSYQTAWLKAHYPAPFMAAVLSADMHNTDKVVTLIEEVRT-MKLRLDAP 816
            FNKSH+AAY +VSYQT WLKA++P  FMA V++ D+H TDK+    EEV+  + L    P
Sbjct: 766  FNKSHAAAYAVVSYQTGWLKANHPVEFMAGVMNCDIHLTDKLAIYFEEVKKGLSLPYVPP 825

Query: 817  DVNASEFKFTVNDEGRIIYGLGAIKGVGEGPVEAITEAR----QDGPFKDLFDFCARVDL 872
             VN SE  F V  +G ++Y LGA+K VG   +  +T AR    +D PF  LFDF  RVDL
Sbjct: 826  CVNRSEATFNV-VKGELVYALGALKNVGVEAMRLVTAARRESGEDKPFATLFDFARRVDL 884

Query: 873  KRINKRTLDGLIRSGALDRLGPYFHDEPKAYQANIDRNRAVLLTAMEEAIKAAEQTARTH 932
            K++ KR L+ L R+G  D+L P               NR  +  ++   +  +       
Sbjct: 885  KKVGKRPLEMLARAGGFDQLDP---------------NRRRVFDSLGALVDYSSAVHDQR 929

Query: 933  DSGHADLFGGLFVEEDADVYGNHRKAKELTL-KERLKGEKDTLGLYLTGHPIDEYEGEIR 991
            +S    LFG    E   D+           L  ERL  E   +G YL+GHP+D+Y   ++
Sbjct: 930  NSSQVSLFG----EAGEDLPEPRLPGTPDWLPAERLSEEFKAIGFYLSGHPLDDYMPALK 985

Query: 992  RFARQRIIDLKPARD----TQTVAGMIIALRVMKNKKGDKMGFITLDDRSGRIEASLFAD 1047
            R     + ++    +       +AG++   +  K+ +G++  F  L D SG  E +LF++
Sbjct: 986  RKDVMTLDEVTAKAERGPFMAKMAGVVAGRQERKSARGNRFAFAQLSDTSGGYEVTLFSE 1045

Query: 1048 AFHSAQSLLQTDAMVVVEGEVSNDDFSGGLRLRIKRVMSMEDARTNLAESLRLKVKTEAL 1107
                ++  L+T A VV+  E + +  S  L+L ++ V  ++ A   +A++ R  ++    
Sbjct: 1046 VLEKSREFLETGAKVVITAEATME--SDQLKLLVRSVGPVDAA---IADAGRSSLRVYIS 1100

Query: 1108 KGDQLRWLGELLK--------RHRGACPVTMEYTGSDAKAMLQFGETWRIDP 1151
            +   +  + ++L+          RG   + ++  G      +  G+ + I+P
Sbjct: 1101 QASAVATVAQVLEDAKSAARNASRGEVYMYLQDPGLPGDVEMDLGQPFPINP 1152