Pairwise Alignments

Query, 1173 a.a., DNA polymerase III subunit alpha from Pseudomonas simiae WCS417

Subject, 1477 a.a., DNA polymerase III subunit alpha from Pedobacter sp. GW460-11-11-14-LB5

 Score =  693 bits (1788), Expect = 0.0
 Identities = 448/1252 (35%), Positives = 666/1252 (53%), Gaps = 139/1252 (11%)

Query: 3    ASFVHLRLHTEYSLVDGLVRIKPLVKTLVGMNMPAVAVTDQNNMCSLVKFYKN------- 55
            A+FVHL  HT++S++   + I  LVK      MPAVA+TD  NM     F  N       
Sbjct: 259  ATFVHLHNHTQFSVLQSTISIPDLVKAAAAQKMPAVAMTDHANMMGAFHFVNNVLNHNKA 318

Query: 56   -------AMGAG-------IKPICGADLWLSNKDPDNPLS----RISLLAMNGVGYRNLT 97
                   A+ AG       + PI G + ++ N   D        ++ LLA N  GY NL 
Sbjct: 319  AEAKNAAAIEAGERPTEVVMTPIVGVEFFVCNNHLDRTAKDNGYQMVLLAKNKKGYHNLA 378

Query: 98   ELIS----RGFIDGQRNGSIIIEREWVAEASEGLIMLSAAKEGEIGIALLGGNPQEAEVL 153
            ++ S    +GF    R     I+RE + +  + +I+LS    GEI   +L     +AE  
Sbjct: 379  KMSSIAYTKGFYYVPR-----IDREVIEQYKDDIIVLSGNLSGEISNKILNMGESQAEEA 433

Query: 154  AKEWMQVFPDRFYLEVQRTNRPNDEEHLHAAVALADKLGAPLVATNDVRFIKKEDFEAHE 213
               W  +F D FY+EV R N+ +++    + +ALA K    LVATN+  +I K+D  AH+
Sbjct: 434  LIWWKNMFGDDFYVEVMRHNQEDEDRVNESLIALARKHAVKLVATNNTYYINKKDANAHD 493

Query: 214  TRVCIGEGRALDDP-RRSKNY-----SEEQYLKSAEEMAELFSDLPEALENSVEIAKRCN 267
              +C+ +G     P  R + Y     ++E Y KS +EM  LF+DLPEA+ N  EI  +  
Sbjct: 494  ILLCVKDGEKQATPIGRGRGYRYGLPNQEYYFKSGDEMKSLFADLPEAIVNIKEIVDKIE 553

Query: 268  IEVKLGKHFLPNFPIPDGMTIDE------------YFRKVSFDGLEERLSVLLPKDTTED 315
            I     +  LP F IP+   + E            + R ++++G ++R  VL P+ T   
Sbjct: 554  IYKLAREVLLPKFDIPEEFLVAEDEADGGKRGENKFLRHLTYEGAKKRYGVLTPEVT--- 610

Query: 316  YEAKRQVYVDRLNFELDIIIQMGFPGYFLIVMDFIQWAKNNGVPVGPGRGSGAGSLVAYV 375
                     +RL+FEL  I + G+PGYFLIV DFI  A+   V VGPGRGS AGS+VAY 
Sbjct: 611  ---------ERLDFELQTIEKTGYPGYFLIVQDFIAEARRRDVSVGPGRGSAAGSVVAYC 661

Query: 376  QKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIEYVAEKYGRNAVSQIITF 435
              IT++DP++YDLLFERFLNP+RVSMPD D+DF  +GR RV+EYV  KYG + V+QIIT+
Sbjct: 662  LWITNIDPIKYDLLFERFLNPDRVSMPDIDIDFDDEGRGRVMEYVIGKYGSSQVAQIITY 721

Query: 436  GSMAAKAVIRDVARVQGKSYGLADRLSKMIPFEVGMTLEKAYE-QEEILRDFIKIDEE-- 492
            G+MAAK+ IRD ARV       AD+++K+IP    M L K +   E+ L++ ++ DE   
Sbjct: 722  GTMAAKSSIRDTARVLDLPLFEADKIAKLIP---NMKLAKIFTLDEKTLKEALRPDEYER 778

Query: 493  -------------AAEIWDMARKLEGVVRNVGKHAGGVVIAPTKLTDFSPIYCDEEGGGL 539
                         +AE    A+ LEG +RN G HA GV+I P+ +T+F P+   ++    
Sbjct: 779  VVELKNLGGLKDLSAETIQQAQILEGSLRNTGIHACGVIITPSDITNFVPVSTAKDSDLY 838

Query: 540  VTQFDKDDVEAAGLVKFDFLGLRTLTIIDWALKTINRDRAKVNEEPLDIAFIPLDDKPTY 599
            VTQFD   VE+AGL+K DFLGL+TLT+I   +K + + R  ++ +P +    P+DD  TY
Sbjct: 839  VTQFDNSVVESAGLLKMDFLGLKTLTLIKDTVKLVKK-RFGIDLDPDN---FPIDDVLTY 894

Query: 600  TLLQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHG 659
             L Q+ ET  +FQ ES GM++ +K+LKP   +DLIA+ AL+RPGP++   +  F+ RK+G
Sbjct: 895  ELFQRGETIGIFQYESPGMQKYMKELKPTVFDDLIAMNALYRPGPME--YIPSFVRRKNG 952

Query: 660  RAELAYPHSDYQYEGLKPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKP 719
              E+      Y  +  +  L  TYGI +YQEQVM ++Q +AG+T G AD+LR+AMGKK+ 
Sbjct: 953  EEEI-----KYDLDACEEYLKETYGITVYQEQVMLLSQKLAGFTKGEADVLRKAMGKKQK 1007

Query: 720  EEMAKQRGGFIEGCATNNIDADLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKAH 779
            + + K +  F++  A    DA     I+   E FA Y FNKSHS  Y  ++YQTA+LKAH
Sbjct: 1008 DVLDKMKPKFVKQAAEKGHDATTLEKIWKDWEAFASYAFNKSHSTCYAWIAYQTAYLKAH 1067

Query: 780  YPAPFMAAVLSADMHNTDKVVTLIEEVRTMKLRLDAPDVNASEFKFTVNDEGRIIYGLGA 839
            YPA +MAAVLS +M +  +V   +EE R M + +  PDVN S+ KF+VN +G + +G+ A
Sbjct: 1068 YPAEYMAAVLSNNMSDIKQVAFFMEECRQMSVTVLGPDVNESDLKFSVNAKGEVRFGMSA 1127

Query: 840  IKGVGEGPVEAITEAR-QDGPFKDLFDFCARVDLKRINKRTLDGLIRSGALDRLGPYFHD 898
            +KGVGE  VE+I E R  +GP+ +++DF  R + + +NK+  +  + SGA D  G   H 
Sbjct: 1128 VKGVGEKAVESIIEERLANGPYGNVYDFAKRSNTRIVNKKAYESFVYSGAFDAFGG--HR 1185

Query: 899  EPKAYQANIDRNRAVLLTAMEEAIKAAEQTARTHDSGHADLFGG----LFVEEDADVYGN 954
                Y    D+     +  +E+ IK A        +  A LFGG    L +E    V   
Sbjct: 1186 AQYFYIGPNDK-----MNGIEKIIKYANDFQNNESTSQASLFGGSKADLILEPSLPV--- 1237

Query: 955  HRKAKELTLKERLKGEKDTLGLYLTGHPIDEYEGEIRRFARQRIIDL------------- 1001
               + E  L +RLK EKD +G++L+GHP+D Y+ E+ +F    +  L             
Sbjct: 1238 ---SPEWALMDRLKYEKDAIGIFLSGHPLDNYKLELDKFCTHGVKQLSIINKVRMGDNNE 1294

Query: 1002 -------KPARDTQTVAGMIIALRVMKNKKGDKMGFITLDDRSGRIEASLFADAFHSAQS 1054
                   K       V G+++       K G   G    +D     E +LF + F   +S
Sbjct: 1295 DILAEFEKLKNRELCVGGLVVTASQRITKTGKPFGTFVFEDYDDASEMALFGEDFLKFKS 1354

Query: 1055 LLQTDAMVVVEGEVSND-DFSGGLRLRIKRVMSMEDARTNLAESLRLKVKTEALKGDQLR 1113
             L     + + G V      +G    +I  +  M + R  LA+SL ++V  E +    +R
Sbjct: 1355 FLTEGYFLQIRGRVGERFGKAGDWEFKITAINLMSELRDKLAKSLTIQVPIERVNDQLMR 1414

Query: 1114 WLGELLKRHRG-----ACPVTMEYTGSDAKAMLQF-GETWRIDPADGLIQAL 1159
             +  +L  ++       C +       + + ML    +  +I+P++  ++ L
Sbjct: 1415 EIEAILADNKANSEQQNCQLNFAIFDREKEIMLDMPSKNLKINPSNKFLEQL 1466