Pairwise Alignments

Query, 1173 a.a., DNA polymerase III subunit alpha from Pseudomonas simiae WCS417

Subject, 1049 a.a., DNA polymerase from Burkholderia phytofirmans PsJN

 Score =  338 bits (867), Expect = 1e-96
 Identities = 244/889 (27%), Positives = 422/889 (47%), Gaps = 39/889 (4%)

Query: 1   MPASFVHLRLHTEYSLVDGLVRIKPLVKTLVGMNMPAVAVTDQNNMCSLVKFYKNAMGAG 60
           M   +  L   T +S + G    + LV     +    +A+TD+ ++  +V+ +  A    
Sbjct: 7   MLPEYAELFAFTNFSFLRGASHGEELVLRASQLGYSGLAITDECSLAGVVRAHVEAKKEK 66

Query: 61  IKPICGADLWLSNKDPDNPLSRISLLAMNGVGYRNLTELISRGFIDGQRNGSIIIEREWV 120
           +  + G+   L N D  +P   + LLA N  GY NL+E I+ G +   + G  ++    +
Sbjct: 67  LPLVIGSYFQLVNADR-SPAFGLILLAQNREGYGNLSEFITLGRMRAAK-GEYLLTPHDI 124

Query: 121 AEASEGLIMLSAAKEGEIGIALLGGNPQEAEVLAKEWMQ-VFPDRFYLEVQRTNRPNDEE 179
           ++  +G   L    +    +       ++A  +  EWM  VF  R ++ +       D+ 
Sbjct: 125 SKPEKGYTHLRGMPDCLAILVPDFPATEDALAVQLEWMNDVFAGRAWVGLTLHQHAMDDI 184

Query: 180 HLHAAVALADKLGAPLVATNDVRFIKKEDFEAHETRVCIGEGRALDDPRRSKNYSEEQYL 239
           H      +AD+   P+VAT +V    +      +T   I   + + +       + E +L
Sbjct: 185 HRGIVEHVADQYRVPVVATGNVVMHVRSRKPLQDTMTAIRLRKTVAECGYDLAPNAEGHL 244

Query: 240 KSAEEMAELFSDLPEALENSVEIAKRCNIEVKLGKHFLPNFPIPDGMTIDEYFRKVSFDG 299
           +S   +  L+     AL  ++ I +RCN  +   ++  P+  +P+G T + Y R+ ++ G
Sbjct: 245 RSRFRLGNLYPT--RALYETLNILERCNFSLDELRYEYPDELVPEGFTHEAYLRQETYIG 302

Query: 300 LEERLSVLLPKDTTEDYEAKRQVYVDRLNFELDIIIQMGFPGYFLIVMDFIQWAKNNGVP 359
              R    +P +  E  E            EL +I ++ +  YFL V D +++A++  + 
Sbjct: 303 AHRRYPNGIPHNVQEQIE-----------HELQLIRELEYEAYFLTVYDIVRFARSQHI- 350

Query: 360 VGPGRGSGAGSLVAYVQKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIEY 419
           +  GRGS A S V Y   +T++DP   ++LFERF++ ER   PD DVDF    R+ VI+Y
Sbjct: 351 LCQGRGSAANSAVCYCLGVTEVDPSRGNMLFERFISKERGEPPDIDVDFEHQRREEVIQY 410

Query: 420 VAEKYGRNAVSQIITFGSMAAKAVIRDVARVQGKSYGLADRLSKMIP-FEVGMTLEKAYE 478
           +  KYGR+  +      +   +  +R+  +  G    + D+++K    F+    L + + 
Sbjct: 411 IYRKYGRDRAAIAAAVSTYRPRGALRESGKALGVDPQIVDKVAKSHQWFDHSADLLQRFA 470

Query: 479 QEEILRDFIKIDEEAAEIW-DMARKLEGVVRNVGKHAGGVVIAPTKLTDFSPIYCDEEGG 537
           +       +  +     +W  +A ++    R++ +H+GG VI+  KLT   P+       
Sbjct: 471 ESG-----LDPENPLIGLWAKLAAQILNFPRHLSQHSGGFVISRGKLTRLVPVENATMAD 525

Query: 538 GLVTQFDKDDVEAAGLVKFDFLGLRTLTIIDWALKTINRDRAKVNEEPLDIAFIPLDDKP 597
               Q+DKDD+EA GL+K D L L  L+ I   L  ++        E  ++  IP +D  
Sbjct: 526 RSAIQWDKDDLEALGLLKIDVLALGMLSAIRRTLDIVSEQCG----ERFEMQDIPPEDAA 581

Query: 598 TYTLLQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRK 657
           TY ++ +A+T  VFQ+ESR    ++ ++KP    DL+  VA+ RPGP+Q G V  ++ R+
Sbjct: 582 TYEMISRADTVGVFQIESRAQMSMLPRMKPREFYDLVIEVAIVRPGPIQGGAVHPYLRRR 641

Query: 658 HGRAELAYPHSDYQYEGLKPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGK- 716
            G   + YP      + L+  L  T G+ ++QEQVMQ+A + AG+T G AD LRRAM   
Sbjct: 642 QGLEPVTYPS-----DALEVALGRTLGVPIFQEQVMQVAILAAGFTPGEADQLRRAMAAW 696

Query: 717 KKPEEMAKQRGGFIEGCATNNIDADLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWL 776
           K+   + K     + G        D A +IF  +  F  YGF +SH+A++ L+ Y ++WL
Sbjct: 697 KRKGGLDKYYDRIVNGMTERGYTKDFAESIFQQIHGFGEYGFPESHAASFALLVYASSWL 756

Query: 777 KAHYPAPFMAAVLSADMHNTDKVVTLIEEVRTMKLRLDAPDVNASEFKFTVNDE-----G 831
           K H P  F+AA+L++          LI++ +   +++   DV  S +   +  E      
Sbjct: 757 KCHEPEAFLAAMLNSMPLGFYSASQLIQDAQRHGVKVLPADVTISNWDSVLERETSASRP 816

Query: 832 RIIYGLGAIKGVGEGPVEAITEARQDGPFKDLFDFCARVDLKRINKRTL 880
            +  GL  +KG+ +G  E I  AR    F  + D   R  L R + + L
Sbjct: 817 SVRLGLSLLKGMKDGAAERIEAARAVRQFSSVSDLARRAQLDRNDLKVL 865