Pairwise Alignments

Query, 269 a.a., SAM-dependent methlyltransferase from Pseudomonas simiae WCS417

Subject, 279 a.a., 23S rRNA methyltransferase A (RefSeq) from Shewanella amazonensis SB2B

 Score =  193 bits (491), Expect = 3e-54
 Identities = 106/265 (40%), Positives = 150/265 (56%), Gaps = 11/265 (4%)

Query: 4   CPICSAPLNAVDNGVACPAGHRFDRARQGYLNLLPVQHKNSRDPGDNLAMVEARRDFLNA 63
           CP+C A L +   G+ CPAGHRFD+A++GY+NLLPVQ K S+DPGDN  M++ARR FL +
Sbjct: 12  CPLCKASLQSETTGLVCPAGHRFDKAKEGYVNLLPVQKKKSKDPGDNKEMMQARRLFLES 71

Query: 64  GHYAPVAQRLAE--LAAERAPARWVDIGCGEGYYTAQIADALPHAD----GYALDISKEA 117
           G Y  ++ R+ E  L    +PA  +D+GCGEGYYT ++   L   D     Y LDIS+ A
Sbjct: 72  GSYQALSDRVGELVLGLPVSPATILDLGCGEGYYTHRLQQVLAKEDIWPQLYGLDISRAA 131

Query: 118 VKRACKRNPALTWLIASMARVPLASGSCQFLASVFSPLDWEEAKRLLSPGGGLMKVGPTS 177
           +K A KR P + + +AS    P AS     +  +++P   EE KRL+ PGG L+ V    
Sbjct: 132 LKAAAKRYPQIHFCVASSFDTPFASEFFDLVVRIYAPSKPEELKRLVKPGGHLLTVSAGP 191

Query: 178 GHLMELRERLYDEVREYTDDKHLALVPDGMSLAHSETLAFTLSLAEPQDRANLLAMTPHG 237
            H   +++R+YD  R + D        DG  +  SE L + L +  P+     L MTP+ 
Sbjct: 192 MHHFAVKQRIYDTPRLHEDSVEQI---DGFEIVSSERLQWQLEMENPELILAFLEMTPYA 248

Query: 238 WRASAERRAQVIEAAEPLVVTVSMR 262
           W+ + E R Q+  A EP    +  R
Sbjct: 249 WKFTPEARTQL--AGEPFSCELDFR 271