Pairwise Alignments

Query, 1021 a.a., multidrug transporter AcrB from Pseudomonas simiae WCS417

Subject, 1026 a.a., Cation/multidrug efflux pump from Pseudomonas stutzeri RCH2

 Score = 1640 bits (4247), Expect = 0.0
 Identities = 830/1019 (81%), Positives = 927/1019 (90%), Gaps = 2/1019 (0%)

Query: 1    MGFNLSEWALRNRQIVLFLMILLAVVGTLSYSKLGQSEDPPFTFKAMVIKTNWPGATAQE 60
            M FNLS WAL+NRQIV++LM+LLA+VG LSYSKLGQSEDPPFTFKAMVI+T WPGATA+E
Sbjct: 1    MRFNLSAWALQNRQIVVYLMLLLAIVGALSYSKLGQSEDPPFTFKAMVIQTQWPGATAEE 60

Query: 61   VSRQVTERIEKKLMETGEYERIVSFSRPGESQVTFIARDSMHSAQIPELWYQVRKKISDI 120
            +SRQVTERIEKKLMETGEYERIVSFSRPGES VTF+ARDSM S  IP+LWYQ+RKKI DI
Sbjct: 61   MSRQVTERIEKKLMETGEYERIVSFSRPGESNVTFMARDSMRSKDIPDLWYQIRKKIGDI 120

Query: 121  RQTLPPDIQGPFFNDEFGTTFGNIYALTGDGFDYAVLKDYADRIQIQLQRVADVGKVELL 180
            + T PP ++GPFFNDEFGTTFGNIYALTG GFDYA+LKDYADRIQ+QLQRV  VGKVEL+
Sbjct: 121  QHTFPPGVRGPFFNDEFGTTFGNIYALTGSGFDYAILKDYADRIQLQLQRVKSVGKVELI 180

Query: 181  GLQDEKIWIELSNLKLATLGLPLAAVQQALQEQNAVSTAGFFETPSERVQLRVSGNFKTV 240
            GLQDEKIWIELSN+KLATLG+PL AV+QAL+ QNAV+ AGF ET S+RVQLRV+G+F+TV
Sbjct: 181  GLQDEKIWIELSNVKLATLGVPLEAVRQALEAQNAVTAAGFVETISDRVQLRVTGSFETV 240

Query: 241  EEIRNFPIRVGDRTFRIGDVADIHRGFNDPPAPRMRYMGADAIGLAVAMRDGGDILVLGK 300
            ++IR+FPIRV  RTFRIGDVA++HRGFNDPPAPRMR+MG  A+GLAV+M+ GGDILVLG+
Sbjct: 241  KQIRDFPIRVAGRTFRIGDVAEVHRGFNDPPAPRMRFMGEPALGLAVSMKSGGDILVLGQ 300

Query: 301  ALEGEFARLQKNLPAGMELRKVSDQPAAVKTSVGEFVQVLAEALAIVLLVSFFSLGVRTG 360
            ALE EFARLQ+ LPAGM+LRKVSDQPAAVKT VGEFV+VL EAL IVLLVSFFSLGVRTG
Sbjct: 301  ALEQEFARLQQELPAGMQLRKVSDQPAAVKTGVGEFVKVLIEALVIVLLVSFFSLGVRTG 360

Query: 361  MVVALAIPLVLAMTFATMYYLGIGLHKISLGALVLALGLLVDDAIIAVEMMAIKMEQGYD 420
            +VVAL+IPLVLAMTFA M YL IGLHKISLGALVLALGL+VDDAIIAVEMMAIKMEQGYD
Sbjct: 361  LVVALSIPLVLAMTFAAMSYLDIGLHKISLGALVLALGLMVDDAIIAVEMMAIKMEQGYD 420

Query: 421  RLKAASFAWTSTAFPMLTGTLITAAGFLPIATAQSSTGEYTRSIFQVVTIALLASWVAAV 480
            RLKAASFAWTSTAFPMLTGTLITAAGFLPIATA SSTGEYTRSIFQVV I+L+ASW+AAV
Sbjct: 421  RLKAASFAWTSTAFPMLTGTLITAAGFLPIATANSSTGEYTRSIFQVVAISLIASWIAAV 480

Query: 481  VFVPYLGEKLLPDLAKIHAAKHGT--DGPDPYGTPFYQRVRRMVEWCVRRRKTVIVLTLL 538
            +FVP +GEKLLPDLAK  A KHGT  +G DPY TPFYQRVRR+V +CVRRRKTVI+LTL 
Sbjct: 481  MFVPLIGEKLLPDLAKKTAHKHGTSSEGHDPYATPFYQRVRRLVTFCVRRRKTVILLTLA 540

Query: 539  LFIGSVALFRFVPQQFFPASGRLELMVDLKLAEGASLSNTADQVKRLEALLKEHAGIDNY 598
            +F  +V LFR VPQQFFPASGRLELMVDLKLAEGASL  T  +V+RLE LLKE AGIDNY
Sbjct: 541  IFAAAVVLFRLVPQQFFPASGRLELMVDLKLAEGASLKATEAEVRRLEELLKERAGIDNY 600

Query: 599  VAYVGTGSPRFYLPLDQQLPAASFAQFVVLAKTIEERESLRTWLIQTLNEQFPDLRSRVT 658
            VAYVGTGSPRFYLPLDQQLPA SFAQFVVLA +IE RE+LR+WLI+ + E FP LR RVT
Sbjct: 601  VAYVGTGSPRFYLPLDQQLPATSFAQFVVLADSIESREALRSWLIERMREDFPSLRGRVT 660

Query: 659  RLENGPPVGYPVQFRVTGEHIEEVRALARKVAVKVRENPHVANVHLDWEEPSKIVYLNID 718
            RLENGPPVGYPVQFRVTGEHI+ VR LAR+VA KV ENPHVANVHLDW+EPSK+V LN+D
Sbjct: 661  RLENGPPVGYPVQFRVTGEHIDVVRGLARQVAAKVNENPHVANVHLDWQEPSKMVRLNVD 720

Query: 719  QDRARALGVSTANLSKFLQSSLTGSSVSQYREDNELIEILLRGTVHERTELSLLPSLAVP 778
            QDRARALGV+TA LS FL+ + TGSSVSQ+REDNELIEILLRGT  ER ELS+LPSLA+P
Sbjct: 721  QDRARALGVTTAELSGFLRRTFTGSSVSQFREDNELIEILLRGTERERLELSMLPSLAIP 780

Query: 779  TDNGKSVALSQIATLEYGFEEGIIWHRNRLPTVTIRADIYGKEQPATLVQQILPTLEGVR 838
            T++G+SV LSQ+ATLEYGFEEG+IWHRNRLPTVT+RAD+YG++QPA LV++I PTL  +R
Sbjct: 781  TESGRSVPLSQVATLEYGFEEGVIWHRNRLPTVTVRADVYGEQQPAALVREIEPTLAEIR 840

Query: 839  AELPDGYLLDVGGTVEDSARGQNSVKAGVPLFIVVVLTLLMLQLRSFSRTAMVFLTAPLG 898
             +LP GYLL+VGGTVEDS RGQ SV AG+PLF++VVLTLLM QL+SFSR+AMVFLTAPLG
Sbjct: 841  DQLPGGYLLEVGGTVEDSERGQRSVNAGMPLFVIVVLTLLMAQLKSFSRSAMVFLTAPLG 900

Query: 899  LIGVTLFLLVFRQPFGFVAMLGTIALSGMIMRNSVILVDQIEQDIKAGLAPWQAIIEATV 958
            +IGV LFLL+F QPFGFVAMLGTIALSGMIMRNSVILVDQIEQDI AG A + AI+EATV
Sbjct: 901  IIGVALFLLLFGQPFGFVAMLGTIALSGMIMRNSVILVDQIEQDIGAGQARFSAIVEATV 960

Query: 959  RRFRPIVLTALAAVLAMIPLSRSVFFGPMAVAIMGGLIVATALTLLFLPALYAAWFRVK 1017
            RRFRPIVLTALA+VLAMIPLSRS+FFGPMAVAIMGGLIVATALTLLFLPALYAAWFRV+
Sbjct: 961  RRFRPIVLTALASVLAMIPLSRSIFFGPMAVAIMGGLIVATALTLLFLPALYAAWFRVR 1019