Pairwise Alignments

Query, 293 a.a., peptide chain release factor 2 from Pseudomonas simiae WCS417

Subject, 319 a.a., peptide chain release factor RF-2 (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  241 bits (616), Expect = 1e-68
 Identities = 124/273 (45%), Positives = 179/273 (65%), Gaps = 8/273 (2%)

Query: 25  GDVVAELARLEENLAKLEFRRMFSHEMDPNNAYLDIQAGSGGTEAQDWANILLRMYLRWA 84
           GDV A  A+  E +  LE + M   E D     L I +G+GGTE+QDWA++L+RMYLR+A
Sbjct: 39  GDVDAAYAKASEAVEALELKNMLRDEADQMACVLKINSGAGGTESQDWASMLMRMYLRYA 98

Query: 85  DKRGFEATIMELSAGEVAGIKGATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGNRRHTS 144
           +  G++ATI  L  G+ AGIK  T++I+G++A+G+L+ E GVHRLVR SP+++  +R TS
Sbjct: 99  ETNGYKATIANLQEGDEAGIKTCTINIEGDFAYGYLKGENGVHRLVRVSPYNAQGKRMTS 158

Query: 145 FSAVFVSPEIDDKVEIEINPADLRIDTYRSSGAGGQHVNTTDSAVRI--------THVPT 196
           F++VFV+P +DD +E+ I PA +  DT+RS GAGGQ+VN  +S VR+        T    
Sbjct: 159 FASVFVTPLVDDSIEVNILPACISWDTFRSGGAGGQNVNKVESGVRLRYQYKDPYTGEEE 218

Query: 197 NTVVSCQNERSQHANKDTAMKMLRAKLYEQEMQKRNAASQALEDTKSDIGWGHQIRSYVL 256
             ++     R Q  N++ AM+ LR+ LY++E+Q R A    +E  K  I WG QIRSYV 
Sbjct: 219 EILIENTETRDQPKNRENAMRQLRSILYDKELQHRMAEQAKVEAGKKKIEWGSQIRSYVF 278

Query: 257 DASRIKDLRTNIERSDCDKVLDGDIDEYLEASL 289
           D  R+KD RTN + SD + V+DG I+E+++A L
Sbjct: 279 DDRRVKDHRTNYQTSDVNGVMDGKIEEFIKAYL 311