Pairwise Alignments

Query, 626 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 629 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  762 bits (1968), Expect = 0.0
 Identities = 395/626 (63%), Positives = 491/626 (78%), Gaps = 1/626 (0%)

Query: 2   NLKFSHKILLAASGVVVLAFALFTLYNDYLQRSTIKQNLESSIQQSGELTASSVQNWLSG 61
           +LKFSHKILLAAS +V+  F+LFTL+NDYLQR+ I+ NL S + + G++TA ++QNWLSG
Sbjct: 4   HLKFSHKILLAASLIVIATFSLFTLFNDYLQRNAIRDNLNSYLDEMGDVTAHNIQNWLSG 63

Query: 62  RILVLESLTQNVAHQGSGADLPGLVDQPAFTSNFQFTYVGQTNGVFTQRPDAKMPDGYDP 121
           RIL++ES  Q++    + A +  L++Q A  S F F+Y+G  +G F  RP  +MP  YDP
Sbjct: 64  RILLVESAAQSIGSDDAEARVAELLEQKALASTFMFSYLGGQDGSFLMRPAEEMPADYDP 123

Query: 122 RQRPWYKQAVAADKPMLTPPYMAAVGGQIV-TIAMPVKKNGELLGVVGGDLSLQTLVKII 180
           R RPWYK A+AA    LT PY+ A  G++V +IA P ++NG  +GVVGGDL L+ LV+II
Sbjct: 124 RARPWYKDAIAAGGSTLTEPYVDAASGELVISIATPAQQNGRNIGVVGGDLGLKVLVEII 183

Query: 181 NSVDFGGIGHAFLVSSDGQVIVSPEQDQVMKNLKDIYPGTQVRIEKVSQDVVLNGQDRIL 240
           N++DF G+GHAFLVS DG+++V P+  +VMK+L +++PG    ++    +  L+GQ RIL
Sbjct: 184 NALDFNGMGHAFLVSGDGKILVHPDGSKVMKSLGELFPGHTPSLDANYSEAELDGQTRIL 243

Query: 241 SFTPISGLPGADWYIGLSIDKDKAYAPLGKFRTSALIAMLIAVVAIAVLLSLLIQVLLRP 300
           SF+ + GLP   WY+G+S+DK KAYA L  FRTSA++A L AV  I +LL +L++VL+RP
Sbjct: 244 SFSRVQGLPSVSWYVGISLDKAKAYAALASFRTSAVVAALTAVGVILLLLGMLMRVLMRP 303

Query: 301 LTTMGVAMQDIAQGEGDLTRRLVVTSKDEFGEVGSAFNQFVERIHASISEVSSATRQVHD 360
           LT MG AM +IA+GEGDLTRRL V SKDEFGE+ SAFN+FVERIH SI EVSSAT+QV++
Sbjct: 304 LTDMGRAMANIAEGEGDLTRRLAVQSKDEFGELASAFNRFVERIHTSIREVSSATQQVNE 363

Query: 361 LSQRVMASSNASIIGSDEQSARTNSVAAAINELGAATQEIARNAADASQHASGASEQADD 420
           ++ RV+A+SN+S+  SDEQ++RTNSVAAAINELGAA QEIARNAADASQ ASGA  QA+D
Sbjct: 364 VAARVLAASNSSMANSDEQASRTNSVAAAINELGAAAQEIARNAADASQQASGARHQAED 423

Query: 421 GRKVVEQTILAMSELSQKISLSCTQIETLNASTDNIGHILDVIKGISQQTNLLALNAAIE 480
           GR+VVEQ I AM ELS KIS SC QIE LNA T +IG IL+VIKGIS+QTNLLALNAAIE
Sbjct: 424 GRQVVEQNIAAMRELSAKISASCAQIEALNAKTVDIGQILEVIKGISEQTNLLALNAAIE 483

Query: 481 AARAGEAGRGFAVVADEVRNLAHRTQESAEEIHKMITSLQVGSREAVTTMNASQTSSEES 540
           AARAGEAGRGFAVVADEVRNLAHRTQ SA+EI +MI  LQVG+  +V TM  SQ  SE S
Sbjct: 484 AARAGEAGRGFAVVADEVRNLAHRTQSSAQEIQQMIEQLQVGAGASVQTMTESQRQSESS 543

Query: 541 VEVANQAGERLVSVTQRIVEIDGMNQSVAAATEEQTAVVETLNVDINQINLLNQQGVANL 600
           V +A++AGERL  VTQRI EIDGMNQSVA ATEEQTAV+E+LN+DI +IN LNQQGV NL
Sbjct: 544 VSIADRAGERLGEVTQRIGEIDGMNQSVATATEEQTAVIESLNMDITEINTLNQQGVENL 603

Query: 601 NETLKDCDALSQQANRLKQLVDSFKI 626
             TL+ C  L QQA RLKQLVDSF+I
Sbjct: 604 QSTLRACGDLDQQARRLKQLVDSFRI 629