Pairwise Alignments

Query, 626 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  295 bits (756), Expect = 3e-84
 Identities = 179/510 (35%), Positives = 290/510 (56%), Gaps = 12/510 (2%)

Query: 122 RQRPWYKQAVAADKPMLTPPYMAAVGGQIVTIAMPVKKNGELLGVVGGDLSLQTLVKIIN 181
           +Q  W+   + + KP +   +  A  G++   A     NG  +   G   S+  +V+++N
Sbjct: 142 QQDGWFFGFIGSGKPTMVSMFQEA-NGEVKMFANYQLVNGNTMS--GMSKSMDDMVRLLN 198

Query: 182 SVDFGGIGHAFLVSSDGQVIVSPEQDQVMKNLKDIY-PGTQVRIEKVSQDVV---LNGQD 237
           S      G  FL ++ G+V +  +++QV  +L+ IY  G    + K   +++     G++
Sbjct: 199 SFKIEDTGFVFLTNAQGEVQIHRQKEQVKSSLQQIYGSGASALLNKSGFNLISTDYQGEE 258

Query: 238 RILSFTPISGLPGADWYIGLSIDKDKAYAPLGKFRTSALIAMLIAVVAIAVLLSL-LIQV 296
            +++   I  +   DW++  ++   + +A L       ++  L AV AI + + + L   
Sbjct: 259 VMVASIYIESM---DWFLVGTVPVHEVFAELDAVAQRMMLTTL-AVAAIFIFMGIFLANS 314

Query: 297 LLRPLTTMGVAMQDIAQGEGDLTRRLVVTSKDEFGEVGSAFNQFVERIHASISEVSSATR 356
           +  P+  +     D+ +G+GDL++R+ V   DE  ++   FN F+E+IH SI +V+  +R
Sbjct: 315 IAMPINQIAKRFTDLGRGDGDLSQRIEVKGNDEIAQLSKGFNGFIEKIHQSIKDVAQTSR 374

Query: 357 QVHDLSQRVMASSNASIIGSDEQSARTNSVAAAINELGAATQEIARNAADASQHASGASE 416
           ++   ++ V   +  +   S +Q  +T  V  AIN++GA   EIA NAA A++ A+ AS 
Sbjct: 375 ELQVAAEGVSRKALVTHDNSQQQRDQTIQVVTAINQMGATISEIASNAATAAETANQASG 434

Query: 417 QADDGRKVVEQTILAMSELSQKISLSCTQIETLNASTDNIGHILDVIKGISQQTNLLALN 476
            AD GR VV +   A+S L+  I  +   +E L ++T  IG ILD I+GIS+QTNLLALN
Sbjct: 435 NADQGRNVVNKAKEAISRLAHDIENTGKVVEQLASTTQEIGSILDAIRGISEQTNLLALN 494

Query: 477 AAIEAARAGEAGRGFAVVADEVRNLAHRTQESAEEIHKMITSLQVGSREAVTTMNASQTS 536
           AAIEAARAG+ GRGFAVVADEVRNLA RT  S EEI KMI  LQ  ++ AV+ M+A +T 
Sbjct: 495 AAIEAARAGDQGRGFAVVADEVRNLASRTASSTEEIQKMINQLQNDAKNAVSAMDAGKTV 554

Query: 537 SEESVEVANQAGERLVSVTQRIVEIDGMNQSVAAATEEQTAVVETLNVDINQINLLNQQG 596
           + + V  +++A + L+S++ RI +I   N  VA ATEEQ+ VV T+N +I +IN +N+  
Sbjct: 555 THQGVAASDEAVQVLMSISDRIHDISDRNTQVATATEEQSTVVHTINQNIEEINAINEVT 614

Query: 597 VANLNETLKDCDALSQQANRLKQLVDSFKI 626
            +   E      +L + + RL +LV +FK+
Sbjct: 615 TSTAEELADASKSLRELSGRLDKLVGNFKL 644