Pairwise Alignments

Query, 626 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  296 bits (759), Expect = 1e-84
 Identities = 200/635 (31%), Positives = 334/635 (52%), Gaps = 18/635 (2%)

Query: 1   MNLKFSHKILLAASGVVVLAFALFTLYNDYLQ-RSTIKQNLESSIQQSGELTASSVQNWL 59
           MN+ F  K++  +S ++++  A F ++  Y   +  +   +E  I +    T   V   L
Sbjct: 1   MNVGFVKKLIFISSFILLVTVA-FVVWEGYTTAKKEVSVVIEDGINEIINKTERFVSLKL 59

Query: 60  SGRILVLESLTQNVAHQGSGAD-LPGLVDQPAFTSNFQFTYVG-QTNG-VFTQRPDAKMP 116
              I +  S+  +++ + S    +  +++  A    F  T  G  +NG V    P+ +  
Sbjct: 60  ESDISLASSIVDSISLRISDEQYINDIINGNAIKKAFLSTGFGFDSNGKVIENDPNWEPE 119

Query: 117 DGYDPRQRPWYKQAVAADKPMLTPPYMAAVGGQ-IVTIAMPVKKN-GELLGVVGGDLSLQ 174
           D YDPR R WY++A    +  +T PY+   G   +V+I+ PV       +G +  D+ L 
Sbjct: 120 DDYDPRSRGWYQEAKKNKRIFITEPYLDTEGKNFLVSISSPVADTMNNFIGAMYFDVDLS 179

Query: 175 TLVKIINSVDFGGIGHAFLVSSDGQVIVSPEQDQVMKNLKDIYPGTQVRIEKVSQDVVLN 234
            + K ++ ++    G+ F+ S+ G+VI+    D++ KN+KDIY G   R++K    + +N
Sbjct: 180 RIQKNVDDINLFEAGYVFITSNTGKVIIHSNTDELGKNVKDIYNG--FRLDKGKVVLSVN 237

Query: 235 GQDRILSFTPISGLPGADWYIGLSIDKDKAYAPLGKFRTSALIAMLIAVVAIAVLLSLLI 294
           G ++ L  +PI G    DW+I   ID+  A   + K +   +    I +V   ++L  ++
Sbjct: 238 GVNKWLYTSPILG---GDWFIIAVIDESIAMQSINKMKYELIFYSAIGLVFGGLILVFIL 294

Query: 295 QVLLRPLTTMGVAMQDIAQGEGDLTRRLVVTSKDEFGEVGSAFNQFVERIHASISEVSSA 354
           + L+ PL T+  A++DIA G GDLT++L      EF E+   FN F E + + I ++ + 
Sbjct: 295 RRLMSPLKTLDSAIKDIASGGGDLTKKLDTNLDKEFSELALGFNSFTEMLGSQIRQLKTI 354

Query: 355 TRQVHDLSQRVMASSNASIIGSDEQSARTNSVAAAINELGAATQEIARNAADASQHASGA 414
              V D +++    +  S +  ++Q      +A A+NE+     E+A +A  A+  A   
Sbjct: 355 ASGVLDGAEKTANEAEVSRLVVEQQLQELEQLATAMNEMAMTASEVANSAQVAADAAKEG 414

Query: 415 SEQADDGRKVVEQTILAMSELSQKISLSCTQIETLNASTDNIGHILDVIKGISQQTNLLA 474
              + +G  VV +T  A+  LS +I  S   ++ L  +TD I  +LDVI  I+ QTNLLA
Sbjct: 415 ESASLEGSSVVHETTDAIQRLSIRIGSSVEDVKELVKATDRIETVLDVINDIADQTNLLA 474

Query: 475 LNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAEEIHKMITSLQVGSREAVTTMNASQ 534
           LNAAIEAARAGE+GRGFAVVADEVR LA RTQ+S  +I ++I  LQ G++    +M+ S+
Sbjct: 475 LNAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTMQISEIIEQLQEGAKNVSRSMDESK 534

Query: 535 TSSEESVEVANQAGERLVSVTQRIVEIDGMNQSVAAATEEQTAVVETLN---VDINQINL 591
             ++  VE  NQ  E++  V Q I  I  MN  +A+A EEQ+ V E +N   V+I  +++
Sbjct: 535 LETDIVVEKTNQVNEKISLVQQAIHRISDMNLQIASAAEEQSLVAEEINNNTVNIKDLSI 594

Query: 592 LNQQGVANLNETLKDCDALSQQANRLKQLVDSFKI 626
              +  +N      + +A   +     +L++ FKI
Sbjct: 595 KLSEAASNAG---TEMNAQVSKVKEQNELLNEFKI 626