Pairwise Alignments

Query, 626 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 626 a.a., Histidine kinase, HAMP region:Cache:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  934 bits (2414), Expect = 0.0
 Identities = 488/626 (77%), Positives = 544/626 (86%)

Query: 1   MNLKFSHKILLAASGVVVLAFALFTLYNDYLQRSTIKQNLESSIQQSGELTASSVQNWLS 60
           MNLKF HKILLAA+GVVVLAFALFTLYNDYLQR TI QNLESS+ Q+G+LTASSVQNWLS
Sbjct: 1   MNLKFRHKILLAAAGVVVLAFALFTLYNDYLQRKTINQNLESSVGQAGQLTASSVQNWLS 60

Query: 61  GRILVLESLTQNVAHQGSGADLPGLVDQPAFTSNFQFTYVGQTNGVFTQRPDAKMPDGYD 120
           GRILVLE+LTQNVA QG  +DL GLV Q A  S FQFTYVG + G FTQRP+  MP GYD
Sbjct: 61  GRILVLENLTQNVAFQGVNSDLSGLVSQSALVSTFQFTYVGDSKGTFTQRPNVDMPAGYD 120

Query: 121 PRQRPWYKQAVAADKPMLTPPYMAAVGGQIVTIAMPVKKNGELLGVVGGDLSLQTLVKII 180
           PRQRPWYK  V A K +L+ PY+A+VGG +VTIA PVK  G++ GVVGGDLSL TLVKII
Sbjct: 121 PRQRPWYKSTVDAGKTILSAPYLASVGGLVVTIASPVKAAGQVTGVVGGDLSLDTLVKII 180

Query: 181 NSVDFGGIGHAFLVSSDGQVIVSPEQDQVMKNLKDIYPGTQVRIEKVSQDVVLNGQDRIL 240
           NSV+FGG+G+AFLVS DGQ+IVSP+++QVMKNLKDIYPG  + ++   ++V LNGQ R+L
Sbjct: 181 NSVEFGGLGYAFLVSGDGQIIVSPDKEQVMKNLKDIYPGQTISLDARLREVTLNGQQRLL 240

Query: 241 SFTPISGLPGADWYIGLSIDKDKAYAPLGKFRTSALIAMLIAVVAIAVLLSLLIQVLLRP 300
           SFTPI+GLP ADWYIGLSIDKDKAYAPL +FR+SA++A+LIAV  IA+LLSLLI+ L+RP
Sbjct: 241 SFTPITGLPSADWYIGLSIDKDKAYAPLSQFRSSAMVAVLIAVAVIALLLSLLIRALMRP 300

Query: 301 LTTMGVAMQDIAQGEGDLTRRLVVTSKDEFGEVGSAFNQFVERIHASISEVSSATRQVHD 360
           LT MG AMQDIAQGEGDLTRRL +  KDEF  +G +FNQFVER+HASI EVSSAT QVHD
Sbjct: 301 LTDMGRAMQDIAQGEGDLTRRLSIQGKDEFAALGGSFNQFVERVHASIVEVSSATLQVHD 360

Query: 361 LSQRVMASSNASIIGSDEQSARTNSVAAAINELGAATQEIARNAADASQHASGASEQADD 420
           LSQRV+ SSN+SI+G DEQSARTN+VAAAINELGAATQEIARNA+DAS  AS A  QA+D
Sbjct: 361 LSQRVVNSSNSSIVGFDEQSARTNNVAAAINELGAATQEIARNASDASIQASEARNQAED 420

Query: 421 GRKVVEQTILAMSELSQKISLSCTQIETLNASTDNIGHILDVIKGISQQTNLLALNAAIE 480
           G+ VVE+TI AMS LS KIS SCTQIE LNAST+NIGHILDVIKGISQQTNLLALNAAIE
Sbjct: 421 GQVVVEKTIHAMSALSAKISDSCTQIEQLNASTENIGHILDVIKGISQQTNLLALNAAIE 480

Query: 481 AARAGEAGRGFAVVADEVRNLAHRTQESAEEIHKMITSLQVGSREAVTTMNASQTSSEES 540
           AARAGEAGRGFAVVADEVRNLAHRTQ SA+EIHKMI SLQ GS+ AV  MN SQTSS+ES
Sbjct: 481 AARAGEAGRGFAVVADEVRNLAHRTQTSADEIHKMIGSLQSGSQHAVLNMNESQTSSQES 540

Query: 541 VEVANQAGERLVSVTQRIVEIDGMNQSVAAATEEQTAVVETLNVDINQINLLNQQGVANL 600
           VEVANQAG RL  VT+RI +IDGMNQSVAAATEEQTAVVETLN+DINQIN LNQQGVANL
Sbjct: 541 VEVANQAGSRLRDVTRRIGDIDGMNQSVAAATEEQTAVVETLNIDINQINTLNQQGVANL 600

Query: 601 NETLKDCDALSQQANRLKQLVDSFKI 626
           NETLKDC ALSQQA RLKQLVDSFKI
Sbjct: 601 NETLKDCAALSQQAGRLKQLVDSFKI 626