Pairwise Alignments

Query, 626 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 630 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  300 bits (767), Expect = 2e-85
 Identities = 205/629 (32%), Positives = 323/629 (51%), Gaps = 16/629 (2%)

Query: 8   KILLAASGVVVLAFALFTLYNDYLQRSTIKQNLESSIQQSGELTASSVQNWLSGRILVLE 67
           ++L ++   V++  A+    + Y  R+   +N +  I Q     A  +  W+  R + + 
Sbjct: 8   RLLFSSLFAVLITVAVLVSISSYFIRNNALENTQHEIDQLANTFAEGIGLWMQDRKMAIT 67

Query: 68  SLTQNVAHQGSGADLPGLVDQPAFTSNFQFTYVGQTNGVFTQRPDAKMPDGYDPRQRPWY 127
           SL + +    S    P L+ Q      F  TY G   G   ++  A     YDPR RPWY
Sbjct: 68  SLKKTIEADPSVQITPYLL-QAHNGMGFALTYFGDEQGNMYRQDPALNVANYDPRIRPWY 126

Query: 128 KQAVAADKPMLTPPYMAA-VGGQIVTIAMPVKKNGELLGVVGGDLSLQTLVKIINSVDFG 186
             A AA+  ++T PY++A +  Q+VTIA PV  +G L GV   +L++  L   +  +   
Sbjct: 127 MDAKAANAIVMTAPYVSATLKKQVVTIAEPVTVSGSLFGVAAANLTIDQLTDAVQRLQVP 186

Query: 187 GIGHAFLVSSDGQVIVSPEQ----DQVMKNLKDIYPG--TQVRIEKVSQDVVLNGQDRIL 240
           G G+  +V   G +I  P+     +Q+ K      P   +Q       ++  L+G+ +++
Sbjct: 187 GKGYTIMVDKTGLIISHPKSQLNNEQLNKIDNSFTPSWLSQRANANTLEERELDGETQLI 246

Query: 241 SFTPISGLPGADWYIGLSIDKDK--AYAPLGKFRTSALIAMLIAVVAIAVLLSLLIQVLL 298
               ++ +P  DW +   ++KD+  + A    +  SA+ A L+ +  + ++    IQ   
Sbjct: 247 Y---VAAVPSTDWELVFVMNKDEIMSQATTLAWWMSAVGAGLLVIFGLVLVAIFKIQ--F 301

Query: 299 RPLTTMGVAMQDIAQGEGDLTRRL-VVTSKDEFGEVGSAFNQFVERIHASISEVSSATRQ 357
           + L  + +A+ DIA+G+GDLT R+    S DE G + S FN+FVER+H  IS +     Q
Sbjct: 302 KDLERVALALNDIAEGDGDLTVRIHTANSHDEIGILASGFNRFVERLHGMISRMHKIAGQ 361

Query: 358 VHDLSQRVMASSNASIIGSDEQSARTNSVAAAINELGAATQEIARNAADASQHASGASEQ 417
           +   +Q   AS+  +      Q      VA A+ E+ +AT+EIA NA   +Q A  A   
Sbjct: 362 LEYQAQGSSASATDNSQRIAVQQDEVTMVATAVTEMASATEEIASNAEHTAQTAQDAVGL 421

Query: 418 ADDGRKVVEQTILAMSELSQKISLSCTQIETLNASTDNIGHILDVIKGISQQTNLLALNA 477
           ++ G+K V Q+  ++  L+ ++  +   I  LN  +  I  IL  I GI++QTNLLALNA
Sbjct: 422 SNHGQKQVMQSQQSIRNLANEVETAGRIISELNEHSQKINSILLTISGIAEQTNLLALNA 481

Query: 478 AIEAARAGEAGRGFAVVADEVRNLAHRTQESAEEIHKMITSLQVGSREAVTTMNASQTSS 537
           AIEAARAGE GRGFAVVADEVR L+ RT  S +EI  MI +LQ  + +AV +M  S   +
Sbjct: 482 AIEAARAGEQGRGFAVVADEVRVLSQRTHSSTQEIQAMIETLQQTAGKAVKSMTQSHDMA 541

Query: 538 EESVEVANQAGERLVSVTQRIVEIDGMNQSVAAATEEQTAVVETLNVDINQINLLNQQGV 597
           E SV  AN A E L+ +++ I EI  M   +A A EEQT+V   +N +   I  +++   
Sbjct: 542 ETSVADANSASESLLQISKAINEISDMASQIATAAEEQTSVTSEINRNTESIREVSENLS 601

Query: 598 ANLNETLKDCDALSQQANRLKQLVDSFKI 626
                ++     L+  A  L+Q V  FK+
Sbjct: 602 IEAQSSMVQAQELAHLAASLQQEVGRFKL 630