Pairwise Alignments

Query, 383 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 361 a.a., Spermidine/putrescine-binding periplasmic protein from Pseudomonas stutzeri RCH2

 Score = 84.3 bits (207), Expect = 5e-21
 Identities = 89/327 (27%), Positives = 142/327 (43%), Gaps = 39/327 (11%)

Query: 10  SALTTALLASASLQAAEPLKAVGAGEGQLDIVAWPGYIERGESDKAYDWVTGFEKETGCK 69
           S L + L+A+A   AA       A    + I  W  YI  GE+      +  FEKETG K
Sbjct: 3   STLKSLLVAAAMTGAAT------AQAASVHIYNWSDYI--GETT-----LEEFEKETGIK 49

Query: 70  VNVKTAATSDEMVS---LMAKGGYDLVTASGDASLRLIVGKRVQPINTALIPNWKNIDPR 126
             V     S+E +    L  + GYD+V  S     + I     Q ++ + +PNW+++DP 
Sbjct: 50  P-VYDVFDSNETLEGKLLAGRSGYDVVVPSNHFLGKQIRAGAFQALDKSKLPNWEHLDPA 108

Query: 127 LKDAPWYVVGQQTYGTPYQWGPNVLMYNTNVFKTA-----PTSWNVIFDPQNLPDGKPNK 181
           L            +  PY WG N + YN    K A       SW+VIF+P+N        
Sbjct: 109 LLKQLQKNDPGNAHAAPYLWGTNGIGYNVEKVKAALGVDEIDSWSVIFEPEN-------- 160

Query: 182 GRVQAYDGPIYIADAALYLKSTKPELGIQNPYELTETQYKAVLELLRAQQPLIHRYWHDT 241
               A  G  ++  A   + +    LG+ +P       Y+   E L A +P + RY+H +
Sbjct: 161 AAKLASCGIAFLDSADEMIPAMLNYLGL-DPNSENAADYQKAEEKLLAVRPHV-RYFH-S 217

Query: 242 TVQMSDFKNEGVVASSAWP---YQVNGLQNEKQ---PIASTIPKEGATGWADTTMLHTEA 295
           +  +SD  N  +  ++ +    +Q      E      IA  IP EGA  W D   +  +A
Sbjct: 218 SKYISDLANGNICVAAGFSGDVFQAAARAEEAGKGIEIAYAIPAEGANLWFDMLAIPADA 277

Query: 296 KHPNCAYKWMDWSLQPKVQGDVAAWFG 322
            +   A+ ++++ L+P+V   V+ + G
Sbjct: 278 SNVEEAHAFINYLLRPEVIAAVSDYVG 304