Pairwise Alignments

Query, 383 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 358 a.a., extracellular solute-binding protein family 1 (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 89.4 bits (220), Expect = 1e-22
 Identities = 85/316 (26%), Positives = 134/316 (42%), Gaps = 41/316 (12%)

Query: 7   ALLSALTTALLASASLQAAEPLKAVGAGEGQLDIVAWPGYIERGESDKAYDWVTGFEKET 66
           A L  +  AL   A+   A P  AV A E  L +  W  Y+ +   D+       F KET
Sbjct: 10  AALVMVGLALAVLAATLFAGP--AVAAEEKVLHVYNWSEYVPQSVLDR-------FTKET 60

Query: 67  GCKVNVKTAATSDEM---VSLMAKGGYDLVTASGDASLRLIVGKRVQPINTALIPNWKNI 123
           G KV   T  +++ M   V L+   GYD+V  S      +     +  I+ + + N+KN+
Sbjct: 61  GIKVVYTTYESNEAMYAKVKLLKGVGYDVVVPSTYFISMMRDDGLLARIDKSKLKNFKNL 120

Query: 124 DPRLKDAPWYVVGQQTYGTPYQWGPNVLMYNTNVFKTAP-TSWNVIFDPQNLPDGKPNKG 182
            P++ + P+    +  Y  PY WG   LM N  V   A  TSWN +  P+          
Sbjct: 121 SPKVLNQPFDPGNE--YSVPYMWGSAGLMVNRKVVDPASITSWNDLNRPE---------- 168

Query: 183 RVQAYDGPIYIAD-----AALYLKSTKPELGIQNPYELTETQYKAVLELLRAQQPLIHRY 237
               + G + ++D       + LK+    +   N     E + KA  E L+   P +  +
Sbjct: 169 ----FAGKVILSDDQRDSMGVALKALGYSVNSTN-----EAEIKAAYEWLKKLLPAVRVF 219

Query: 238 WHDTTVQMSDFKNEGVVASSAWPYQVNGLQNEKQPIASTIPKEGATGWADTTMLHTEAKH 297
             D T     F +E V A   W        +E + +    P+EG   W D+  +   AKH
Sbjct: 220 --DVTASKQAFISEEVAAGLIWNGDAYIAASENENLVYVYPREGVPLWVDSLAIPVGAKH 277

Query: 298 PNCAYKWMDWSLQPKV 313
            + A+K++D+ L+P V
Sbjct: 278 KDNAHKFIDFLLRPDV 293