Pairwise Alignments

Query, 446 a.a., ribosomal protein S12 methylthiotransferase from Pseudomonas simiae WCS417

Subject, 474 a.a., tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB from Vibrio cholerae E7946 ATCC 55056

 Score =  150 bits (380), Expect = 6e-41
 Identities = 120/398 (30%), Positives = 204/398 (51%), Gaps = 41/398 (10%)

Query: 18  GCPKALVDSERILTQLRM-EGYDVVSTYQDADVVVVNTCGFIDSAKAESLEVIGE----A 72
           GC     DS ++   L    GY++    ++ADV+++NTC   + A+ +    +G      
Sbjct: 11  GCQMNEYDSSKMADLLNAANGYELTEIPEEADVLLLNTCSIREKAQEKVFHQLGRWKTLK 70

Query: 73  IKENGKVI-VTGCMGVEEGN-IRNVHPSVLAVTGPQQYEQVVNAVHDVVPPRQDHNPLID 130
            K+ G VI V GC+  +EG+ IR+  P V  + GPQ   ++   +      +    P++D
Sbjct: 71  DKKPGVVIGVGGCVATQEGDSIRDRAPYVDVIFGPQTLHRLPEMIKQ---SQTSDAPVMD 127

Query: 131 LVPPQGIKLT----PRHY---AYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLDEAQR 183
           +  P+  K      PR     A++ I EGC+  C++C++P  RG+ VSRP+ DVL E  +
Sbjct: 128 ISFPEIEKFDRLPEPRAEGPTAFVSIMEGCSKYCTYCVVPYTRGEEVSRPMDDVLFEIAQ 187

Query: 184 LVKSGVKELLVISQDTSAYGVDVKYRTGFWNGAPVKTRMTELCEALSSLGVWVRLHYV-- 241
           L + GV+E+ ++ Q+ +AY      R    +G        EL   ++++    R+ +   
Sbjct: 188 LAEQGVREVNLLGQNVNAY------RGATHDGGICS--FAELLRLVATIDGIDRIRFTTS 239

Query: 242 YPYPHVDELIPLMA-AGKILPYLDIPFQHASPKVLKAMKRP--AFEDKTLARIKNWREIC 298
           +P    D++I +     +++ +L +P Q  S ++L  MKRP  A E K++  I+  R+  
Sbjct: 240 HPLEFTDDIIAVYEDTPELVSFLHLPVQSGSDRILTMMKRPHTAIEYKSI--IRKLRKAR 297

Query: 299 PELIIRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANLLDLAVVPDD 358
           P++ I S FIVGFPGET++DFQ  +  + +   D    F +SP  G PA     A  P D
Sbjct: 298 PDIQISSDFIVGFPGETDKDFQDTMKLIRDVDFDMSFSFIFSPRPGTPA-----ADYPCD 352

Query: 359 LKQD-RWERFMAHQQAISSARL---QLRIGKEIEVLID 392
           L ++ + ER    QQ I+S  +   +L +G E  +L++
Sbjct: 353 LSEEVKKERLYELQQQINSQAMRYSRLMLGTEQRILVE 390