Pairwise Alignments

Query, 446 a.a., ribosomal protein S12 methylthiotransferase from Pseudomonas simiae WCS417

Subject, 425 a.a., tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase from Methanococcus maripaludis S2

 Score =  122 bits (306), Expect = 2e-32
 Identities = 104/411 (25%), Positives = 180/411 (43%), Gaps = 38/411 (9%)

Query: 11  KVGFVSLGCPKALVDSERILTQLR-MEGYDVVSTYQDADVVVVNTCGFIDSAKAESLEVI 69
           K+     GC     D++ I   +   E +++     D+D++V+NTC      +   +  I
Sbjct: 2   KIYIEGYGCTLNTADTQIIKNSVNEFEDFELTDNVDDSDIIVINTCIVRQETEHRMISRI 61

Query: 70  GEAIKENGKVIVTGCMGVE-EGNIRNVHPSVLAVTGPQQYEQVVNAVHDVVPP------- 121
                 + KV+V GCM       I N+   ++    P++ +   N + D +         
Sbjct: 62  EYFKSLDKKVVVAGCMAKALSKKIENLADVLIM---PREAQHSGNILKDKLLKDFSEKNN 118

Query: 122 --------RQDHNPLIDLVPPQGIKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRP 173
                       N  I  V  QG+         L I EGC  SC++CI+   RG L S  
Sbjct: 119 ESTQNLNFEDKLNEKIKKVSSQGL------ITALPICEGCLGSCTYCIVKRARGNLASYD 172

Query: 174 VGDVLDEAQRLVKSGVKELLVISQDTSAYGVDVKYRTGFWNGAPVKTRMTELCEALSSLG 233
              ++ +A+ LVKSG K LLV +QDT+ YG+D        N   +   + ++ E      
Sbjct: 173 RDLIVKKAEELVKSGTKCLLVTAQDTACYGLD--------NNDSLPNLINDISEIPEKFA 224

Query: 234 VWV-RLHYVYPYPHVDELIPLMAAGKILPYLDIPFQHASPKVLKAMKRPAFEDKTLARIK 292
           + +  +H  +  P +DELI    + K++ +L +P Q    +VLK M R    D+ ++ + 
Sbjct: 225 MRIGMMHAKFAEPILDELIESFKSEKVVKFLHLPIQSGDDQVLKDMNRNYTVDEYISVLN 284

Query: 293 NWREICPELIIRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANLLDL 352
            ++     L   +  IVGFP ETEE F+  L+ + + + D     +YS  +   A +  L
Sbjct: 285 EFKSKIKNLNFTTDVIVGFPTETEEAFENTLEIVKKIKPDFTHAAKYSQRKYTKAAI--L 342

Query: 353 AVVPDDLKQDRWERFMAHQQAISSARLQLRIGKEIEVLIDEVDEQGAVGRC 403
             V   ++++R E     ++ +S    +  IG+  E+L+ + D  G    C
Sbjct: 343 KQVDTKIRKERSEILNELRRELSYENNKRHIGETFEILVTK-DNMGVTDNC 392