Pairwise Alignments

Query, 236 a.a., RNA-binding protein S4 from Pseudomonas simiae WCS417

Subject, 241 a.a., 23S rRNA pseudouridine synthase E from Vibrio cholerae E7946 ATCC 55056

 Score = 48.1 bits (113), Expect = 2e-10
 Identities = 37/139 (26%), Positives = 56/139 (40%), Gaps = 18/139 (12%)

Query: 108 ASADLQAKASGLLVFTQDWKILRKLTADAAKIEQEYVVEVEGDMVAHGLNRLNHGLTYK- 166
           A+  L   + GLL+ T D  +  +LT   +K  + Y V+VEG      L  L HG+T K 
Sbjct: 99  AAGRLDRDSEGLLILTNDGILQARLTQPQSKAPKTYWVQVEGSPQESDLEALRHGVTLKD 158

Query: 167 GKELPA------VKASWQNENRLRFAMKNPQPGVIALFCEA-----------VGLKVIAI 209
           G  LPA          W     +RF    P   +     E            +G   + +
Sbjct: 159 GPTLPAKVDIMPEPTLWPRNPPVRFRAAIPTTWLAITLMEGRNRQVRRMTAHIGFPTLRL 218

Query: 210 RRIRIGGVSIGKVPVGQWR 228
            R  +G  ++G +  G+WR
Sbjct: 219 IRYSMGDWNLGDLQPGEWR 237