Pairwise Alignments

Query, 236 a.a., RNA-binding protein S4 from Pseudomonas simiae WCS417

Subject, 532 a.a., pseudouridine synthase family protein from Dechlorosoma suillum PS

 Score =  191 bits (485), Expect = 2e-53
 Identities = 101/239 (42%), Positives = 146/239 (61%), Gaps = 8/239 (3%)

Query: 6   RLSKRLIELVGCSRREAELFIEGGWVSVDGEVIDEPQFKVT-TQKVALDPDAKATVPEPV 64
           RLSK + E   CSRREA+ +IE GWV VDG+V+ E   ++  T ++ +DP+A+    E V
Sbjct: 294 RLSKVMSEQGLCSRREADEWIEAGWVKVDGKVVSELGSRIVPTARIEVDPEARKHQAESV 353

Query: 65  TILLHAPAGVDA-------ETAMASISAETLSEEHRFGKRPLKGHFLRLTASADLQAKAS 117
           TI+LH P G  +       E A+  +  E   EE + G R    H  RL  +  L   ++
Sbjct: 354 TIILHKPIGYVSGQAEDGYEPAVVLVQPENRWEEDKGGTRFKSAHLRRLAPAGRLDIDST 413

Query: 118 GLLVFTQDWKILRKLTADAAKIEQEYVVEVEGDMVAHGLNRLNHGLTYKGKELPAVKASW 177
           G+LV TQD ++ ++L  + + +E+EY+V VEG+++ +GL  LNHGL+  G +L     SW
Sbjct: 414 GMLVLTQDGRVAKRLIGEDSTVEKEYLVRVEGELIENGLALLNHGLSLDGVKLKPAHVSW 473

Query: 178 QNENRLRFAMKNPQPGVIALFCEAVGLKVIAIRRIRIGGVSIGKVPVGQWRYLSGKEKF 236
           QNE +LRF ++  +   I   CE VGLKV+ ++RIRIG V +GK+P GQWRYL   EKF
Sbjct: 474 QNEEQLRFVLREGRKRQIRRMCELVGLKVVGLKRIRIGSVVLGKLPPGQWRYLRSDEKF 532