Pairwise Alignments

Query, 308 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  167 bits (422), Expect = 4e-46
 Identities = 101/279 (36%), Positives = 148/279 (53%), Gaps = 13/279 (4%)

Query: 1   MRFTLRQLQVFVAVAQQESVSRAAGLLALSQSAASTSITELERQSSCQLFDRAGKRLSLN 60
           MR++L+QL VF AVA   SVS+AA  LAL+QSA S S+ +LE+     LF+R GK+++L 
Sbjct: 1   MRYSLKQLAVFDAVADCGSVSQAADKLALTQSATSMSLAQLEKMLGRPLFERQGKQMALT 60

Query: 61  ALGHQLLPQAVALLDQAKEIEDLLNGKSGF-------GSLAVGATLTIGNYLATLLIGSF 113
             G  L P+A  LL  A++IE       GF       G + +GA+ T   +L   LI   
Sbjct: 61  HWGMWLRPKAKRLLQDAQQIE------MGFYDQHLLSGEIRLGASQTPAEHLVPDLISII 114

Query: 114 MQQHPESQVKLHVQNTAHIVHQVAHYEIDLGLIEGDCSHPDIEVQTWVEDELVVFCAPQH 173
               PE ++ L V++T  ++  V  Y+ DLG+IEG C    I  + W  D L +  +  H
Sbjct: 115 DSDFPEIRISLGVKSTKGVIEGVLDYKYDLGIIEGRCDDNRIYQEVWCRDHLTIVASAHH 174

Query: 174 HLAKRGVASMDELTHEAWILREQGSGTRLTFDQAMRHHRSALNIRLELEHTEAIKRAVES 233
             AKR   S+ +L    W+LREQG+GTR  FD  +      L++  E EH   ++  V +
Sbjct: 175 PFAKRESVSLAQLEQAKWVLREQGAGTRNIFDSVIHPLIPDLDVWREYEHVPVLRTLVAN 234

Query: 234 GLGIGCISRLALRDAFRRGSLVPVETPDLDLARQFYFIW 272
           G  + C+  L +      G LV +  P+L++ R   FIW
Sbjct: 235 GPYLTCLPYLDVERFIESGLLVALNVPELNMERTLSFIW 273