Pairwise Alignments

Query, 308 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 304 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  161 bits (407), Expect = 2e-44
 Identities = 97/273 (35%), Positives = 152/273 (55%), Gaps = 1/273 (0%)

Query: 1   MRFTLRQLQVFVAVAQQESVSRAAGLLALSQSAASTSITELERQSSCQLFDRAGKRLSLN 60
           M+++L+Q+ VF AVA  ESVS AA  L+++QSA S S+ +LE      LF R G RL+L+
Sbjct: 1   MKYSLKQIMVFDAVASLESVSAAARKLSMTQSAVSMSLGQLENLLGRPLFIRQGNRLTLS 60

Query: 61  ALGHQLLPQAVALLDQAKEIEDLLNGKSGF-GSLAVGATLTIGNYLATLLIGSFMQQHPE 119
             G+ L P+A  LL  A++IE  L+ +    G   + ++ T   +L   LI       PE
Sbjct: 61  HWGNWLRPRARRLLQDAQQIELGLHEQHLISGRFRLCSSQTAAEHLLPELISKIDTDFPE 120

Query: 120 SQVKLHVQNTAHIVHQVAHYEIDLGLIEGDCSHPDIEVQTWVEDELVVFCAPQHHLAKRG 179
            +++L V+NT ++V  + +YE D G+IEG      +  + W++D LVV  +P H  AK+ 
Sbjct: 121 LRIELTVENTENVVEGLLNYEYDFGIIEGRNDDSRLYQEQWLDDHLVVVASPHHPYAKQT 180

Query: 180 VASMDELTHEAWILREQGSGTRLTFDQAMRHHRSALNIRLELEHTEAIKRAVESGLGIGC 239
             S+ +L    W+LREQG+GTR  F+ A+      L++  E EH   +K  V++G  +  
Sbjct: 181 NISLAQLEQARWVLREQGAGTRRIFEGAIHGVIEKLHVWKEYEHVSLLKALVKNGPYLSS 240

Query: 240 ISRLALRDAFRRGSLVPVETPDLDLARQFYFIW 272
           +  L +      G LV + TP L++ R   F+W
Sbjct: 241 LPFLDVEKEVAAGELVILPTPQLNMQRHLSFVW 273