Pairwise Alignments

Query, 239 a.a., hypothetical protein from Pseudomonas simiae WCS417

Subject, 245 a.a., DTW domain-containing protein from Vibrio cholerae E7946 ATCC 55056

 Score =  187 bits (476), Expect = 1e-52
 Identities = 93/217 (42%), Positives = 141/217 (64%), Gaps = 2/217 (0%)

Query: 3   HAVSRLRTQRLARAVRPFLNRGSRAERCPGCRVIPEYCLCAWRPKIAATSAMCLLMHDVE 62
           HA   L   RL R+ +PFL RG + +RC  C V   +CLCA +P I +  A+ L++ + E
Sbjct: 4   HAFHHLYQYRLERSTKPFLARGGKIKRCLYCLVELTHCLCAHQPDIESQVAVLLIVSENE 63

Query: 63  PMKPSNTGWLIADVIDDTTAFAWSRTEVDPDLLTLLADPQWQPYIVFPGEFVAPE-RVVS 121
             KPSNTG LIAD + +T  + WSRTE +P++L LL++P + P ++FP E    + RV+S
Sbjct: 64  VFKPSNTGRLIADTVKETYVYQWSRTEPNPEMLALLSNPAYYPVLIFPAETEEDKTRVLS 123

Query: 122 EVKVG-QSKRPLFILLDGTWSEARKMFRKSPYLEHLPVLSLAPEQLSRYKLRRSKRDDHF 180
            +      K+PL +L+DG+W EA+++FRKSPYL  LP++S+ PE+LS+Y +R+S+ + H 
Sbjct: 124 PIPTEFAGKKPLLVLIDGSWREAKRIFRKSPYLASLPLVSVEPERLSQYIMRKSENEQHL 183

Query: 181 CTAEVAALCLELADDRVASEVLDAYLDVFSTHYLAAK 217
            TAEVA+L L++  DR ++  L  + + F   YL  K
Sbjct: 184 ATAEVASLVLDMFGDRHSASTLSLWFEAFKETYLTCK 220