Pairwise Alignments

Query, 352 a.a., recombinase RecA from Pseudomonas simiae WCS417

Subject, 354 a.a., DNA recombination/repair protein RecA from Vibrio cholerae E7946 ATCC 55056

 Score =  505 bits (1301), Expect = e-148
 Identities = 249/346 (71%), Positives = 294/346 (84%)

Query: 1   MDDNKKKALAAALGQIERQFGKGAVMRMGDHDRQAIPAISTGSLGLDIALGIGGLPKGRI 60
           MD+NK+KALAAALGQIE+QFGKG++MR+GD+    +  ISTGSL LDIALG GGLP GRI
Sbjct: 1   MDENKQKALAAALGQIEKQFGKGSIMRLGDNRAMDVETISTGSLSLDIALGAGGLPMGRI 60

Query: 61  VEIYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDT 120
           VEI+GPESSGKTTLTL +IA AQ+ G TCAF+DAEHALDP YA KLGVN+D+LLVSQPDT
Sbjct: 61  VEIFGPESSGKTTLTLELIAAAQREGKTCAFIDAEHALDPVYAKKLGVNIDELLVSQPDT 120

Query: 121 GEQALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGN 180
           GEQALEI D L RS A+DVIVVDSVAAL PKAEIEGEMGD H+GLQAR++SQA+RK+TGN
Sbjct: 121 GEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEMGDSHMGLQARMLSQAMRKLTGN 180

Query: 181 IKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE 240
           +K +NC+ IFINQIRMKIGVMFG+PETTTGGNALKFYASVRLDIRRTGA+KEG+EVVG+E
Sbjct: 181 LKQSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGEEVVGNE 240

Query: 241 TRVKVVKNKVAPPFRQAEFQILYGKGIYLNGEMIDLGVLHGFVEKSGAWYAYNGSKIGQG 300
           TR+KVVKNK+A PF++A  QI+YG+G    GE+IDLGV H  VEKSGAWY+YNG KIGQG
Sbjct: 241 TRIKVVKNKIAAPFKEANTQIMYGQGFNREGELIDLGVKHKMVEKSGAWYSYNGDKIGQG 300

Query: 301 KANSAKFLADNPDIAATLEKQIRDKLLTAAPDVKAAANREPVEEVE 346
           KAN+ K+L +NP+IA TL+K++R+ LL        A      ++VE
Sbjct: 301 KANACKYLKENPEIAKTLDKKLREMLLNPENMQLIAETSSAADDVE 346