Pairwise Alignments

Query, 335 a.a., hypothetical protein from Pseudomonas simiae WCS417

Subject, 480 a.a., phage late control gene D protein GPD from Synechococcus elongatus PCC 7942

 Score =  113 bits (282), Expect = 1e-29
 Identities = 95/301 (31%), Positives = 148/301 (49%), Gaps = 18/301 (5%)

Query: 21  ERLLEWEHTDLAGFVSDQLKLTLDI-EGLEGLPGLGGHIGLRVGYRESGL--VDKGRFKI 77
           +RLL     D A  +SD++++ LD  + L  +P  G  + + +GY E G   V  G + +
Sbjct: 21  DRLLSLTVVDEAEQLSDRVEIVLDDRDKLLEIPKSGTWLKVYLGYAEGGKLPVYMGTYAV 80

Query: 78  TQRTPSLFPLRVVLVATAAPFDEPEFKKRRTASHGPISLGALFRQLTTRHGFSPRVAHDL 137
              T S  P  +V+ ATA     P  K  RT S    +LG + R + +R G   R+  D+
Sbjct: 81  DDLTLSNGPRSMVVRATALE-TAPAMKDSRTQSWHDTTLGEIARTIASRSGLELRIVGDV 139

Query: 138 EGEQIQHIDQTNESDMAFLTRLAKRFDAVAKPVDE-LYVLGRKGQIKSLSGKVLPDVQLS 196
               I+H DQT ESD+AFLTRLA+R    AKP+D+ L++  R   I +  G  L   Q  
Sbjct: 140 GSIPIKHEDQTAESDIAFLTRLARRLKITAKPIDKALWITRRASDIPATPGVEL--AQRI 197

Query: 197 ITRDNRPGDRAFVSASFTETSRATYSGAQARWWDAAAGKQHVVEVGGAPFKVMT----QR 252
           +  D     RA      T  +R  YS  +AR++D    K+ ++ VG     + T    Q 
Sbjct: 198 VKGDEVSDWRA------TIKNRGAYSRVKARYFDQDEKKEKLLTVGPEDGNLQTFEEKQL 251

Query: 253 YQSEAEARTAAEGEMRRVGREGLQVSVICPGNPSFGAEGLLLLDESWPGFMRGRWSIDSV 312
           Y++  EA+ AA+  ++ +    + +     G+P F AEG + L + +   + G W I +V
Sbjct: 252 YKTRDEAQRAADSRLQSLQSGEVTIDFSMEGDPEFTAEGQVTL-QDFRALVDGTWYIRNV 310

Query: 313 T 313
           T
Sbjct: 311 T 311