Pairwise Alignments

Query, 388 a.a., tail protein from Pseudomonas simiae WCS417

Subject, 505 a.a., major tail sheath protein from Marinobacter adhaerens HP15

 Score =  106 bits (264), Expect = 2e-27
 Identities = 93/337 (27%), Positives = 156/337 (46%), Gaps = 30/337 (8%)

Query: 68  SGTLFHAVYQILKVVKVPVYVVIVEEGATPADTINNVIGGDEPVTGRKLGLAALASVPED 127
           +GTL  A+  I   V   V V+ VEEG    +T  NV+GG    TG   G+ AL      
Sbjct: 177 TGTLPDAMDGIFDQVGAVVIVIRVEEGQDDPETTANVVGGVNATTGNLEGVHALLGAESV 236

Query: 128 L----TIIGAPGFTGTK------AVAGEFASFGKRIKARVVLDGKDASVADQVTYSGELG 177
           +     I+ APG+T  +      AV  E     +R++A +V DG + +      Y+    
Sbjct: 237 VGFSPRILCAPGYTHQRESGQRNAVVAELLGIAERLRAVIVADGPNTTDDAAQQYAN--- 293

Query: 178 GADLGVDRCLLVHNMPSVYSKAAKKNVFLAPSSLAIAA-LAKVKQ----WESPGNQ-VTF 231
             D G  R  LV   P+V       +    P S  +A  +AK+      W SP N+ +  
Sbjct: 294 --DFGSSRVYLVDPWPTVLQSDG--SYAAEPGSGRVAGVIAKIDNDQGFWWSPSNKPING 349

Query: 232 AEDVSRVVEYNILDTSTEGDLLNRYGVSYYARTILGGFSLLGNRSITGK----FISYVGL 287
               +R V++ + D ++  +LLN  G++   R    G+ L GNRS+T      F+S    
Sbjct: 350 IVGTARPVDFKLGDANSRANLLNEGGIATIIRQ--DGYRLWGNRSLTDDTKWIFLSVRRT 407

Query: 288 EDAISRKLVKAGQKAMAKNLTKSFMDQEVKRINDWLQTLVADETIPGGSVYLHPELNSVE 347
            D I+  + +A   A+ +N+TK++++     +N ++ +LVA   + GG  +  P+LN+ E
Sbjct: 408 ADMINDSIQRAHLWAVDRNITKTYVEDVTDGVNAYIASLVAQGALLGGRCWPDPDLNTPE 467

Query: 348 KYKNGTWFIVIDYGRYAPNEHMIYQ-LNARDEIIEQF 383
             + G  +   ++    P EH+ ++ +   D + E F
Sbjct: 468 NIQLGKVYFNFEFTPPYPAEHITFRSMLVNDYVTEVF 504



 Score = 25.0 bits (53), Expect = 0.005
 Identities = 12/37 (32%), Positives = 18/37 (48%)

Query: 7  FEHNGITVNATESPEAMGGLGDNVIGLVGTAPKAHAS 43
          F H    +     P  +  +   VIG+VGTAP+A  +
Sbjct: 4  FLHGVEVLEIDTGPRPIQTVRSGVIGIVGTAPEAEGA 40