Pairwise Alignments

Query, 388 a.a., tail protein from Pseudomonas simiae WCS417

Subject, 391 a.a., tail sheath protein from Herbaspirillum seropedicae SmR1

 Score = 72.4 bits (176), Expect = 2e-17
 Identities = 98/392 (25%), Positives = 164/392 (41%), Gaps = 29/392 (7%)

Query: 9   HNGITV-NATESPEAMGGLGDNVIGLVGTAPKAHA-SIPKNAPFRI-NSFTTQALLDPTG 65
           H+G+ V    E    +  +   VIG++ TA  A A + P +    I N  + QA    TG
Sbjct: 6   HHGVRVIEINEGTRPIRTISTAVIGVIVTADDADAEAFPLDTAVLITNVVSAQAKAGKTG 65

Query: 66  TESGTLFHAVYQILKVVKVPVYVVIVEEGATPADTINNVIGG---DEPVTGRKLGLAALA 122
           T    +   +  I    K  V +V V E  + A+  + VIGG   +   TG K  LAA A
Sbjct: 66  T----MRRVLEAIAAQAKPLVVLVRVAEAESEAEQTSLVIGGVSAEGRYTGVKALLAAQA 121

Query: 123 SVPEDLTIIGAPGFTGTKAVAGEFASFGKRIKARV-VLDGKDASVADQVTYSGELGGADL 181
            +     IIGAP F  TKAV    AS  + ++A V       A+ A    Y  E G  ++
Sbjct: 122 KLGIKPRIIGAP-FLDTKAVTNALASIAQTLRAFVYAYCWNCATAAAATAYRAEFGQREV 180

Query: 182 GVDRCLLVHNMPSVYSKAAKKNVFLAPSSLAIAALAKVKQ---WESPGNQVTF--AEDVS 236
                +L+      +  A  K+  ++  + A+   AK+ +   W    + V       +S
Sbjct: 181 -----MLLWPEFVSWDTATSKDANISAVAFALGLRAKIDEQTGWHKTLSNVVVNGPTGIS 235

Query: 237 RVVEYNILDTSTEGDLLNRYGVSYYARTILGGFSLLGNRS--ITG---KFISYVGLEDAI 291
           R V +++ D +T+  +LN   V+      + G+   G+R+  + G    F +Y      +
Sbjct: 236 RDVFWDLQDPATDAGVLNAKEVTTLIN--MSGYRFWGSRTCEVQGGYFPFENYTRTAQVL 293

Query: 292 SRKLVKAGQKAMAKNLTKSFMDQEVKRINDWLQTLVADETIPGGSVYLHPELNSVEKYKN 351
           +  + +A    +   +T S +   V  IN   ++L A   I  G  +   + N  +  K 
Sbjct: 294 ADTIAEAHLVYVDLPMTPSLVKDLVASINAKFRSLKASGYIIDGEAWFDDKYNDKDTLKA 353

Query: 352 GTWFIVIDYGRYAPNEHMIYQLNARDEIIEQF 383
           G   I   Y    P E++++Q    D+ +  F
Sbjct: 354 GKLTIDYSYTPVPPVENLLFQQRITDQYLADF 385