Pairwise Alignments

Query, 212 a.a., endonuclease III from Pseudomonas simiae WCS417

Subject, 232 a.a., endonuclease III from Methanococcus maripaludis S2

 Score = 55.8 bits (133), Expect = 6e-13
 Identities = 49/154 (31%), Positives = 75/154 (48%), Gaps = 8/154 (5%)

Query: 14  HEDNPE-PKTELAYTTPFELLIAVILSAQSTDVGVNKATAKLYPVAN-TPEAIYALGVDG 71
           H +N E PKT+      FE+ I  IL+  ++   V K+   L  +   TPE I  L ++ 
Sbjct: 44  HPNNYEYPKTK---NQCFEVCIGAILTQNTSWPSVEKSLKNLRKLIEITPENIINLDIEQ 100

Query: 72  LSEYIKTIGLYNSKAKNVIETCRLLVELHGSEVPQTREALEALPGVGRKTANVVLNTAFR 131
           L E IK  G YN K+  +       ++L+   VP TRE L  L GVG +TA+ +L  AF+
Sbjct: 101 LKEAIKPSGYYNQKSVRLKGFSEFFIKLN--HVP-TREELLKLNGVGPETADSMLLYAFK 157

Query: 132 QLTMAVDTHIFRVSNRTGIARGKNVVEVEKQLMK 165
             +  VD +  R+     +  G    +  K+L +
Sbjct: 158 VPSFVVDAYTKRILINLNLIDGSEKYDKIKELFE 191