Pairwise Alignments

Query, 210 a.a., LuxR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 214 a.a., Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain from Pseudomonas stutzeri RCH2

 Score =  124 bits (312), Expect = 1e-33
 Identities = 78/213 (36%), Positives = 124/213 (58%), Gaps = 6/213 (2%)

Query: 1   MNKVLIVDDHPVIRLAV-RMLMERHGYEVVAETDNGVDALQLAREHMPDIVILDIGIPKL 59
           M +VL+VDDH ++R  + RML +  G +V+ + D+G DA++ ARE  PD+V++D+ +P +
Sbjct: 1   MIRVLVVDDHDLVRTGISRMLADISGLQVIGQADSGEDAIRKARELKPDVVLMDVKMPGI 60

Query: 60  DGLEVICRLSSTKQPAPFKVLVLTSQAPGHFSMRCMQAGAAGYVCKQQDLTELLSAIKAV 119
            GLE   +L   +     KV+ +T      F  R +QAGAAGY+ K   L E++ AI+ V
Sbjct: 61  GGLEATRKL--LRSYPDLKVIAVTICEEDPFPTRLLQAGAAGYLTKGAGLEEMVQAIRMV 118

Query: 120 LSGYSYFPNQALN--SVRSTMGNASEADMVERLSGREMMVLQQLARGRTNKEIADGMFLS 177
             G  Y   Q     +++S     SE+   + LS RE+ +   +A  +  + I+D + LS
Sbjct: 119 FGGQRYISPQIAQQLALKSFQPQLSESPF-DLLSEREIQIALMIANCQKVQSISDKLCLS 177

Query: 178 NKTVSTYKTRLLLKLNARSLVDLIELAQRNGLV 210
            KTV+TY+ R+  KL+  S V+L  LA R+G+V
Sbjct: 178 PKTVNTYRYRIFEKLSITSDVELALLAVRHGMV 210