Pairwise Alignments

Query, 302 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 300 a.a., OmpA/MotB from Pseudomonas syringae pv. syringae B728a

 Score =  487 bits (1254), Expect = e-142
 Identities = 237/302 (78%), Positives = 271/302 (89%), Gaps = 2/302 (0%)

Query: 1   MRQQYLALLSVFASLPAMALTFQTRLENIEWKVEGDQFECRLTQPITDFGSGEFVRRAGE 60
           MRQ+YLALLS+FASLPAMA++FQTRLE+IEWKVEGDQFECRLTQPITDFG+GEFVRRAGE
Sbjct: 1   MRQRYLALLSMFASLPAMAISFQTRLESIEWKVEGDQFECRLTQPITDFGAGEFVRRAGE 60

Query: 61  QATFRLKAYNGSLGAGSATLLAAAAPWQPGRGDINLGAVRAGSGDVLFNSSQAQAGRLFN 120
           QATFRLKA    LG GSATLLAAAAPWQPGRGDINLG+VR  +GD+ FN+SQAQAGRL +
Sbjct: 61  QATFRLKASYNMLGNGSATLLAAAAPWQPGRGDINLGSVRVSNGDIPFNTSQAQAGRLIS 120

Query: 121 GLLEGRSPTVRHYGREGGYSEIRLLPVKFNKAYNDYQLCTAKLLPMNYDQVKQTEVGFPG 180
           GL++GRSP +RHY R+GG  E+RLLPVKF+KA++DYQ CTAKLLPMN+DQ+KQ EVGFPG
Sbjct: 121 GLMDGRSPLIRHYTRDGGQMEVRLLPVKFSKAFSDYQACTAKLLPMNFDQIKQAEVGFPG 180

Query: 181 GGIELDAAAKKKLDVILAFMKADPTVNHIELNGHSDNSGNRLTNRDVSRRRGLAVMDYFK 240
           GGIELDA AK +LD ++A++KADPTVN IEL+GHSDNSGNRLTNRD+SRRR LAVMDYFK
Sbjct: 181 GGIELDARAKARLDNMVAYLKADPTVNRIELDGHSDNSGNRLTNRDLSRRRALAVMDYFK 240

Query: 241 ANGIPESQITLRFHGESYPLAPNTNAANRARNRRVNIQLERVAAPEKPAPQATGPSNAAH 300
           A G+PE QITLRFHGE YPLAPNTN ANRARNRRVN+ LERVA  E+P P A+  ++AAH
Sbjct: 241 AQGVPEQQITLRFHGERYPLAPNTNEANRARNRRVNVHLERVAPDERPVPVAS--ASAAH 298

Query: 301 TS 302
           TS
Sbjct: 299 TS 300