Pairwise Alignments

Query, 285 a.a., glycerol uptake facilitator GlpF from Pseudomonas simiae WCS417

Subject, 239 a.a., aquaporin family protein from Methanococcus maripaludis S2

 Score =  106 bits (264), Expect = 6e-28
 Identities = 81/261 (31%), Positives = 119/261 (45%), Gaps = 38/261 (14%)

Query: 9   SLSSQCMAEFLGTALLIFFGTGCVAALKVAGASFGLWEISIIWGVG------------VS 56
           S+  + +AE LGT +L+FFG G  A   +   + G   I ++ G+G            ++
Sbjct: 2   SMIKKLIAECLGTGILVFFGPGAAAMTLMIANNTGTAGIGLLGGLGDWFAIGFSFAIAIA 61

Query: 57  MAIYLSAGISGAHLNPAVSIALCIFADFDKRKLPFYILAQIAGAFCSAALVYTLYSNLFF 116
             IY    ISGAH+NPAV+I L     F  +    YI+AQ+ GA   + L +        
Sbjct: 62  AVIYTMGRISGAHINPAVTIGLWAVKKFPTKDTVLYIIAQLIGAAIGSLLFFACI----- 116

Query: 117 DYEQTHHMVRGSQASLELASVFSTYPHALLSTAQAFLVEMVITAILMGVIMALTDDNNGL 176
                         S+ +  + +T P A +S  QA L E + T +LM VIM +  D    
Sbjct: 117 -----------GIDSVTIGGLGATAPFAGISYFQAILAEFIGTFLLMFVIMGVAVDKRA- 164

Query: 177 PRGPLAPLLIGLLIAVIGSAMGPLTGFAMNPARDFGPKLMTFFAGWGEMAFTGGRDIPYF 236
           P G  A L+IGL +  I +  G + G ++NPAR FGP L+    G             YF
Sbjct: 165 PDG-FAGLVIGLTVGAIITTTGNIAGASLNPARTFGPYLIDSIYGLNLWY--------YF 215

Query: 237 LVPIFAPIVGACLGAAAYRGL 257
            + I  P++GA + A  Y  L
Sbjct: 216 PIYIIGPVLGAIVAAFTYEYL 236