Pairwise Alignments

Query, 449 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 446 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  434 bits (1117), Expect = e-126
 Identities = 227/436 (52%), Positives = 296/436 (67%), Gaps = 2/436 (0%)

Query: 14  VLIVEDDPHVLLGCQQALALEDIPSVGVGSAEEALKRI-GENFAGIVISDIRLPGIDGLE 72
           V +++D+  + +   Q+  L D+ +    S EEAL  I  +    +++SDI LPG+ G  
Sbjct: 4   VFLIDDESDIRIALAQSFELADLNAQFFASVEEALLAIKAQGLPLVIVSDICLPGLSGQN 63

Query: 73  LLTRLKALDKSLPVVLITGHGDISMAVGAMRNGAYDFMEKPFSPERLVDVARRALEQRGL 132
           LL+ +   D  LPV+LITGHGDISMAV AM +GAYDF+EKPF+PERL+D   RA+E+R L
Sbjct: 64  LLSSVLHQDSELPVILITGHGDISMAVKAMHDGAYDFIEKPFAPERLIDTVHRAIEKRRL 123

Query: 133 AREVWSLRRQLAERDSLEGRIIGRSPAMQNLRELIANVADTSANVLIEGETGTGKELVAR 192
             E   L+R L    +L  RIIG + A+Q LR+ IA VADT A++L+ GETGTGKELVAR
Sbjct: 124 TLENRQLKRSLKVSQTLGPRIIGETAAIQTLRDTIAQVADTQADILLFGETGTGKELVAR 183

Query: 193 CLHDFSRRHAHQFVALNCGGLPENLFESEIFGHEANAFTGAGKRRIGKIEHAHEGTLFLD 252
            LH+ S R    FVA+NCG +PENL ESE++GHE  AFTGA  RR+GK EHA  GTLFLD
Sbjct: 184 SLHEQSSRREQNFVAINCGAVPENLIESELYGHEKGAFTGADSRRVGKFEHAQGGTLFLD 243

Query: 253 EVESMPINLQIKLLRVLQERTLERLGSNQSVAVDCRVIAATKSDLDELSRANQFRSDLYY 312
           E+ESMP+  QI+LLRVLQER +ER+GSN+ + +D RVIAATK DL + +   +FR DLYY
Sbjct: 244 EIESMPMQAQIRLLRVLQERVIERIGSNELIPLDIRVIAATKIDLKQAAAEGKFRQDLYY 303

Query: 313 RLNVVTLELPPLRERREDILQLFEHFLQQSSLRFDRSVPELDNQTLSSLMSHDWPGNVRE 372
           RLN+VTL +PPLRERREDI  LF HFL  ++ R+ ++   L    + SL+SHDWPGNVRE
Sbjct: 304 RLNIVTLTIPPLRERREDIPALFHHFLLVAAARYGKAATALTASDVQSLLSHDWPGNVRE 363

Query: 373 LRNVAERFA-LGLPAFKKSGTSSGSQGLAFTEAVEAFERNLLNDALQRSGGNLTQASQEL 431
           LRN AER+  LG  A         S+ L   E V  FE++LL   L   GG++    + L
Sbjct: 364 LRNAAERYVLLGKLAQFAESHEPKSKLLGLNEQVAEFEKSLLEQTLIECGGSIKATMERL 423

Query: 432 GMAKTTLFDKVKKYGL 447
            + + TL+DK++KY L
Sbjct: 424 HLPRKTLYDKMQKYQL 439